RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 TMEM222Q9H0R3 208 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 UQCR10Q9UDW1 63 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 TRAV14DV4A0A0A6YYC5 116 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 TRAV13-1A0A0B4J241 112 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 KLHL30-AS1Q8NEE0 82 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 ANAPC13Q9BS18 74 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 TCF19Q9Y242 345 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 ZNF257Q9Y2Q1 563 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 TRAV12-1A0A0B4J245 112 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 ESDP10768 282 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 FAM206AQ9NX38 181 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 TMEM8BA6NDV4 472 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 ZP1P60852 638 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 C1QTNF12Q5T7M4 302 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 SP7Q8TDD2 431 aaPredicted RBP14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 GTSF1LQ9H1H1 148 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 GCHFRP30047 84 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 KBTBD11-OT1A0A1B0GTJ5 212 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 F8VVB4 439 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 F8VWA3 439 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 IGLV2-23P01705 113 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 SDHCQ99643 169 aaPredicted RBP14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 PRSS22Q9GZN4 317 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 B9A039 149 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 DTX2Q86UW9 622 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 PRADC1Q9BSG0 188 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 UMODP07911 640 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 ATP5G3P48201 142 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 HSPE1P61604 102 aaKnown RBP14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 COL4A1P02462 1669 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 SLC25A28Q96A46 364 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 TMEM126AQ9H061 195 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 IGHV4-4A0A075B6R2 117 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 HAPLN4Q86UW8 402 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 CHTOPQ9Y3Y2 248 aaKnown RBP14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 NPIPB13A6NJU9 1138 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 NPIPB5A8MRT5 1133 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 GZMMP51124 257 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 OCIAD2Q56VL3 154 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 PCP4P48539 62 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 H1FOOQ8IZA3 346 aaPredicted RBP14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 HOXD4P09016 255 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 NBEAP1P0C6P0 100 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 SLC25A39Q9BZJ4 359 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 FOXL1Q12952 345 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 COL11A2P13942 1736 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 A0A0G2JLM5 398 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 LY75O60449 1722 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 SIPA1L3O60292 1781 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 F5H768 121 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 CA11O75493 328 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 C5orf47Q569G3 176 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 ANKRD36A6QL64 1941 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 NEU4Q8WWR8 484 aaPredicted RBP14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 G6PC2Q9NQR9 355 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 IGLV1-36A0A0B4J1U3 117 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 TPTE2P1Q5T6R2 138 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 CLDN16Q9Y5I7 305 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 DPRXA6NFQ7 191 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 M0R2P5 195 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 STAG3L3P0CL85 134 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 RHOGP84095 191 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 LY6HO94772 140 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 LIMS1P48059 325 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 GAGE2EQ4V326 116 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 GAGE2DQ9UEU5 116 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 RS1O15537 224 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 FCN3O75636 299 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 PLXNA1Q9UIW2 1896 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 TRAV8-3A0A0A6YYJ7 113 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 ZNF729A6NN14 1252 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 VWC2LB2RUY7 222 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 IRF3Q14653 427 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 THAP8Q8NA92 274 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 C1orf159Q96HA4 380 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 MBD3L4A6NDZ8 208 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 MBD3L3A6NE82 208 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 MBD3L5A6NJ08 208 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 ASPHD2Q6ICH7 369 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 MBD3L2Q8NHZ7 208 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 DLX4Q92988 240 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 TMEM86BQ8N661 226 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 ITGB1BP1O14713 200 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 HLA-DQA1P01909 254 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 CECR9P0C854 216 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 PAPPA-AS1Q5QFB9 102 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 APC2O95996 2303 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 HLA-DQB1P01920 261 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 FAM181AQ8N9Y4 354 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 RBM38Q9H0Z9 239 aaKnown RBP14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 C5orf66Q9H5L9 145 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 OR5P3Q8WZ94 311 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 TMEM54Q969K7 222 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 NPCDR1Q9BY65 106 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 MBNL3Q9NUK0 354 aaKnown RBP14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 A0A087WWL8 130 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 KNCNA6PVL3 124 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 PYYP10082 97 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms