RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 HOXC12P31275 282 aa10.96□□□□□ -0.65
HDAC4-214ENST00000535493 HSPE1P61604 102 aaKnown RBP10.96□□□□□ -0.65
HDAC4-214ENST00000535493 MOGAT3Q86VF5 341 aa10.96□□□□□ -0.65
HDAC4-214ENST00000535493 RNASE8Q8TDE3 154 aaKnown RBP10.96□□□□□ -0.65
HDAC4-214ENST00000535493 SPRY4Q9C004 299 aa10.96□□□□□ -0.65
HDAC4-214ENST00000535493 IDI2-AS1Q9NZ38 188 aa10.96□□□□□ -0.65
HDAC4-214ENST00000535493 KLF13Q9Y2Y9 288 aaPredicted RBP10.96□□□□□ -0.65
HDAC4-214ENST00000535493 OR51B2Q9Y5P1 312 aa10.96□□□□□ -0.65
HDAC4-214ENST00000535493 J3QR06 171 aa10.96□□□□□ -0.66
HDAC4-214ENST00000535493 APCSP02743 223 aa10.96□□□□□ -0.66
HDAC4-214ENST00000535493 GDF5OSQ5U4N7 250 aa10.96□□□□□ -0.66
HDAC4-214ENST00000535493 GCSAMQ8N6F7 178 aa10.96□□□□□ -0.66
HDAC4-214ENST00000535493 MDS2Q8NDY4 140 aa10.96□□□□□ -0.66
HDAC4-214ENST00000535493 OR52E5Q8NH55 327 aa10.96□□□□□ -0.66
HDAC4-214ENST00000535493 OR2T6Q8NHC8 308 aa10.96□□□□□ -0.66
HDAC4-214ENST00000535493 PRR7Q8TB68 274 aa10.96□□□□□ -0.66
HDAC4-214ENST00000535493 SLC45A2Q9UMX9 530 aa10.96□□□□□ -0.66
HDAC4-214ENST00000535493 LAMTOR5O43504 91 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 SPRY3O43610 288 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 PTTG1IPP53801 180 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 MFAP2P55001 183 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 AARDQ4LEZ3 155 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 ZNF439Q8NDP4 499 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 BORCS7Q96B45 105 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 SLC35D1Q9NTN3 355 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 CALYQ9NYX4 217 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 UQCR10Q9UDW1 63 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 PIEZO2Q9H5I5 2752 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 CORTO00230 105 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 LINC00614P0C842 121 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 OR4S2Q8NH73 311 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 DDB2Q92466 427 aa10.95□□□□□ -0.66
HDAC4-214ENST00000535493 MCRIP2Q9BUT9 160 aaKnown RBP10.95□□□□□ -0.66
HDAC4-214ENST00000535493 ASH1LQ9NR48 2969 aaKnown RBP10.95□□□□□ -0.66
HDAC4-214ENST00000535493 PRRX1P54821 245 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 TRAT1Q6PIZ9 186 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 SPATA12Q7Z6I5 190 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 C18orf32Q8TCD1 76 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 OR2V2Q96R30 315 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 TMEM14BQ9NUH8 114 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 CLEC5AQ9NY25 188 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 JPT1Q9UK76 154 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 RPH3ALQ9UNE2 315 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 C20orf202A1L168 122 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 IGKV3-15P01624 115 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 AMY1AP04745 511 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 SRSF6Q13247 344 aaKnown RBP10.94□□□□□ -0.66
HDAC4-214ENST00000535493 EBLN2Q6P2I7 272 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 RNASEKQ6P5S7 137 aaKnown RBP10.94□□□□□ -0.66
HDAC4-214ENST00000535493 Q6ZT83 130 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 NEUROG1Q92886 237 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 CBY1Q9Y3M2 126 aa10.94□□□□□ -0.66
HDAC4-214ENST00000535493 E7EUB6 86 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 ACP1P24666 158 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 GNG5P63218 68 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 INO80CQ6PI98 192 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-214ENST00000535493 DHRS13Q6UX07 377 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 SPACA3Q8IXA5 215 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 C9orf106Q8NAJ2 232 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 ZNF331Q9NQX6 463 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-214ENST00000535493 LRBAP50851 2863 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 TRAV9-1A0A075B6T8 112 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 H3BTX0 84 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 TSPOP30536 169 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 KIR2DL2P43627 348 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-214ENST00000535493 REG1BP48304 166 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 FOXA3P55318 350 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-214ENST00000535493 C17orf58Q2M2W7 97 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 OR10J3Q5JRS4 329 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 ARRDC1-AS1Q9H2J1 176 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 TIMM8BQ9Y5J9 83 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-214ENST00000535493 IGHV2OR16-5A0A0B4J2B6 119 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 HSBP1O75506 76 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 TDGF1P13385 188 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 UBE2L3P68036 154 aaKnown RBP10.93□□□□□ -0.66
HDAC4-214ENST00000535493 WDR73Q6P4I2 378 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 OSTCQ9NRP0 149 aa10.93□□□□□ -0.66
HDAC4-214ENST00000535493 SPTBN2O15020 2390 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 IGHV1-18A0A0C4DH31 117 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 VWC2LB2RUY7 222 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 M0R2Z0 102 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 MGST3O14880 152 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 TMEM164Q5U3C3 297 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 TMEM167BQ9NRX6 74 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 TRBV9A0A0B4J1U6 114 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 TRGV8A0A0C4DH27 118 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 H0Y8G0 127 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 J3QW42 95 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 ISLRO14498 428 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 APELAP0DMC3 54 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 IGLL1P15814 213 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 PPOXP50336 477 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 STUMQ69YW2 141 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 NUP35Q8NFH5 326 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 OR2D3Q8NGH3 330 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 IGF2BP2-AS1Q96M15 143 aa10.92□□□□□ -0.66
HDAC4-214ENST00000535493 SMIM27A0A1W2PRY6 76 aa10.91□□□□□ -0.66
HDAC4-214ENST00000535493 SRRM5B3KS81 715 aa10.91□□□□□ -0.66
HDAC4-214ENST00000535493 MT-ND6P03923 174 aa10.91□□□□□ -0.66
HDAC4-214ENST00000535493 C10orf55Q5SWW7 151 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms