RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 TXN2Q99757 166 aa9.22□□□□□ -0.93
VEGFA-223ENST00000523125 SPAG8Q99932 426 aaPredicted RBP9.22□□□□□ -0.93
VEGFA-223ENST00000523125 C20orf24Q9BUV8 137 aa9.22□□□□□ -0.93
VEGFA-223ENST00000523125 INS-IGF2F8WCM5 200 aa9.21□□□□□ -0.94
VEGFA-223ENST00000523125 ST8SIA3O43173 380 aa9.21□□□□□ -0.94
VEGFA-223ENST00000523125 CTSDP07339 412 aaPredicted RBP9.21□□□□□ -0.94
VEGFA-223ENST00000523125 TMBIM6P55061 237 aa9.21□□□□□ -0.94
VEGFA-223ENST00000523125 MRPS10P82664 201 aaKnown RBP9.21□□□□□ -0.94
VEGFA-223ENST00000523125 ERHP84090 104 aaKnown RBP9.21□□□□□ -0.94
VEGFA-223ENST00000523125 SCGB2B2Q4G0G5 96 aa9.21□□□□□ -0.94
VEGFA-223ENST00000523125 PVRIGQ6DKI7 326 aa9.21□□□□□ -0.94
VEGFA-223ENST00000523125 Q6ZRM9 215 aa9.21□□□□□ -0.94
VEGFA-223ENST00000523125 RAB2BQ8WUD1 216 aa9.21□□□□□ -0.94
VEGFA-223ENST00000523125 OR10C1Q96KK4 312 aa9.21□□□□□ -0.94
VEGFA-223ENST00000523125 RTBDNQ9BSG5 229 aaPredicted RBP9.21□□□□□ -0.94
VEGFA-223ENST00000523125 NXF2Q9GZY0 626 aaKnown RBP9.21□□□□□ -0.94
VEGFA-223ENST00000523125 COPZ2Q9P299 210 aa9.21□□□□□ -0.94
VEGFA-223ENST00000523125 SMPXQ9UHP9 88 aa9.21□□□□□ -0.94
VEGFA-223ENST00000523125 CTDSPLO15194 276 aa9.2□□□□□ -0.94
VEGFA-223ENST00000523125 NUPL2O15504 423 aaKnown RBP9.2□□□□□ -0.94
VEGFA-223ENST00000523125 AKR1C2P52895 323 aa9.2□□□□□ -0.94
VEGFA-223ENST00000523125 RELQ04864 619 aaPredicted RBP9.2□□□□□ -0.94
VEGFA-223ENST00000523125 CCDC71LQ8N9Z2 235 aa9.2□□□□□ -0.94
VEGFA-223ENST00000523125 LHFPL5Q8TAF8 219 aa9.2□□□□□ -0.94
VEGFA-223ENST00000523125 GLYATL2Q8WU03 294 aa9.2□□□□□ -0.94
VEGFA-223ENST00000523125 PINX1Q96BK5 328 aaKnown RBP9.2□□□□□ -0.94
VEGFA-223ENST00000523125 BCL7BQ9BQE9 202 aa9.2□□□□□ -0.94
VEGFA-223ENST00000523125 GGTLC1Q9BX51 225 aa9.2□□□□□ -0.94
VEGFA-223ENST00000523125 TMEM222Q9H0R3 208 aa9.2□□□□□ -0.94
VEGFA-223ENST00000523125 CCDC59Q9P031 241 aaKnown RBP9.2□□□□□ -0.94
VEGFA-223ENST00000523125 LOC102724200A0A096LPH7 203 aaPredicted RBP9.19□□□□□ -0.94
VEGFA-223ENST00000523125 IGHV7-4-1A0A0J9YVY3 117 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 LCE6AA0A183 80 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 CHEK1O14757 476 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 B3GALNT1O75752 331 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 ATG12O94817 140 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 CDS2O95674 445 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 IFNA17P01571 189 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 OR5AC1P0C628 307 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 RNASE2P10153 161 aaKnown RBP9.19□□□□□ -0.94
VEGFA-223ENST00000523125 ETV6P41212 452 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 MEF2DQ14814 521 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 TRIM16LQ309B1 348 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 ODF3L2Q3SX64 289 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 AARDQ4LEZ3 155 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 LAMTOR1Q6IAA8 161 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 SLC35G3Q8N808 338 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 OR4C16Q8NGL9 310 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 DIRAS2Q96HU8 199 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 RNF2Q99496 336 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 SOSTQ9BQB4 213 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 OVOL2Q9BRP0 275 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 SLIRPQ9GZT3 109 aaKnown RBP9.19□□□□□ -0.94
VEGFA-223ENST00000523125 UBQLN2Q9UHD9 624 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 GPR132Q9UNW8 380 aa9.19□□□□□ -0.94
VEGFA-223ENST00000523125 IGHV3-49A0A0A0MS15 119 aa9.18□□□□□ -0.94
VEGFA-223ENST00000523125 ANKRD20A5PA0PJZ0 165 aa9.18□□□□□ -0.94
VEGFA-223ENST00000523125 GNG7O60262 68 aa9.18□□□□□ -0.94
VEGFA-223ENST00000523125 AKAIN1P0CW23 69 aa9.18□□□□□ -0.94
VEGFA-223ENST00000523125 SNCAP37840 140 aa9.18□□□□□ -0.94
VEGFA-223ENST00000523125 IL18Q14116 193 aa9.18□□□□□ -0.94
VEGFA-223ENST00000523125 SURF2Q15527 256 aaPredicted RBP9.18□□□□□ -0.94
VEGFA-223ENST00000523125 BSXQ3C1V8 233 aa9.18□□□□□ -0.94
VEGFA-223ENST00000523125 FAM90A2PQ658T7 463 aa9.18□□□□□ -0.94
VEGFA-223ENST00000523125 TMEM116Q8NCL8 245 aa9.18□□□□□ -0.94
VEGFA-223ENST00000523125 RRNAD1Q96FB5 475 aaKnown RBP9.18□□□□□ -0.94
VEGFA-223ENST00000523125 RHPN1-AS1Q9BWJ2 59 aa9.18□□□□□ -0.94
VEGFA-223ENST00000523125 FNDC4Q9H6D8 234 aaPredicted RBP9.18□□□□□ -0.94
VEGFA-223ENST00000523125 MRPL36Q9P0J6 103 aaKnown RBP9.18□□□□□ -0.94
VEGFA-223ENST00000523125 TEX13DA0A0J9YY54 714 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-223ENST00000523125 CRYM-AS1A6NIL9 109 aa9.17□□□□□ -0.94
VEGFA-223ENST00000523125 DISC1C4P0D8 188 aa9.17□□□□□ -0.94
VEGFA-223ENST00000523125 H3BMQ9 156 aa9.17□□□□□ -0.94
VEGFA-223ENST00000523125 GSTZ1O43708 216 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-223ENST00000523125 YIF1AO95070 293 aa9.17□□□□□ -0.94
VEGFA-223ENST00000523125 TMEM50AO95807 157 aa9.17□□□□□ -0.94
VEGFA-223ENST00000523125 TNFSF8P32971 234 aa9.17□□□□□ -0.94
VEGFA-223ENST00000523125 RPL5P46777 297 aaKnown RBP9.17□□□□□ -0.94
VEGFA-223ENST00000523125 MLANAQ16655 118 aa9.17□□□□□ -0.94
VEGFA-223ENST00000523125 TOMM20LQ6UXN7 152 aa9.17□□□□□ -0.94
VEGFA-223ENST00000523125 SELENOHQ8IZQ5 122 aaKnown RBP9.17□□□□□ -0.94
VEGFA-223ENST00000523125 OR51S1Q8NGJ8 323 aa9.17□□□□□ -0.94
VEGFA-223ENST00000523125 NAA60Q9H7X0 242 aa9.17□□□□□ -0.94
VEGFA-223ENST00000523125 ZFAND3Q9H8U3 227 aa9.17□□□□□ -0.94
VEGFA-223ENST00000523125 RABL2AQ9UBK7 228 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-223ENST00000523125 RABL2BQ9UNT1 228 aa9.17□□□□□ -0.94
VEGFA-223ENST00000523125 C14orf166Q9Y224 244 aaKnown RBP9.17□□□□□ -0.94
VEGFA-223ENST00000523125 IGHV3OR16-13A0A075B7E8 117 aa9.16□□□□□ -0.94
VEGFA-223ENST00000523125 TRAV14DV4A0A0A6YYC5 116 aa9.16□□□□□ -0.94
VEGFA-223ENST00000523125 IGHV3-74A0A0B4J1X5 117 aa9.16□□□□□ -0.94
VEGFA-223ENST00000523125 A0A1B0GU03 582 aa9.16□□□□□ -0.94
VEGFA-223ENST00000523125 OR4C46A6NHA9 309 aa9.16□□□□□ -0.94
VEGFA-223ENST00000523125 APOHP02749 345 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-223ENST00000523125 NPBWR1P48145 328 aa9.16□□□□□ -0.94
VEGFA-223ENST00000523125 HOXA1P49639 335 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-223ENST00000523125 SPCS3P61009 180 aa9.16□□□□□ -0.94
VEGFA-223ENST00000523125 FAM219AQ8IW50 185 aa9.16□□□□□ -0.94
VEGFA-223ENST00000523125 LILRB2Q8N423 598 aa9.16□□□□□ -0.94
VEGFA-223ENST00000523125 DUSP18Q8NEJ0 188 aa9.16□□□□□ -0.94
VEGFA-223ENST00000523125 RBPMSQ93062 196 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 318.2 ms