RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 HSPB1P04792 205 aaKnown RBP5.86□□□□□ -1.47
NIPBL-208ENST00000514335 GATA1P15976 413 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-208ENST00000514335 RPL22P35268 128 aaKnown RBP5.86□□□□□ -1.47
NIPBL-208ENST00000514335 NMSQ5H8A3 153 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 PLA2G2CQ5R387 149 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 PCP2Q8IVA1 136 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 OVCA2Q8WZ82 227 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 DSCR8Q96T75 97 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 PDCD1LG2Q9BQ51 273 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 NEUROG3Q9Y4Z2 214 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 CHCHD2Q9Y6H1 151 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-208ENST00000514335 TMEM262E9PQX1 116 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 H3BMG7 143 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 HSPB6O14558 160 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 VCYO14598 125 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 CTLA4P16410 223 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 EMDP50402 254 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 TAS2R45P59539 299 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 Q499Y3 187 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 CLDN19Q8N6F1 224 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 IGFBPL1Q8WX77 278 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 ELSPBP1Q96BH3 223 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 BORCS8Q96FH0 119 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 SPACA5Q96QH8 159 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 AGMATQ9BSE5 352 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 PRO0461Q9UI25 63 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 RALGAPA1Q6GYQ0 2036 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 TNRC6BQ9UPQ9 1833 aaKnown RBP5.85□□□□□ -1.47
NIPBL-208ENST00000514335 LYPD3O95274 346 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 SLC2A10O95528 541 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 NAPSAO96009 420 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 RENP00797 406 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 CD58P19256 250 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 DLX1P56177 255 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 CCL20P78556 96 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 ZNF90Q03938 601 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 ZNF816Q0VGE8 651 aaPredicted RBP5.85□□□□□ -1.47
NIPBL-208ENST00000514335 SRSF9Q13242 221 aaKnown RBP eCLIP5.85□□□□□ -1.47
NIPBL-208ENST00000514335 MRPL55Q7Z7F7 128 aaKnown RBP5.85□□□□□ -1.47
NIPBL-208ENST00000514335 LINC00596Q86U02 117 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 VKORC1L1Q8N0U8 176 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 DLX4Q92988 240 aaPredicted RBP5.85□□□□□ -1.47
NIPBL-208ENST00000514335 BORCS7Q96B45 105 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 TNFRSF12AQ9NP84 129 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 OTORQ9NRC9 128 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 PCTPQ9UKL6 214 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 LOC107986453A0A1B0GWG9 222 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 H0YIZ8 118 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 SYS1-DBNDD2H3BUS1 97 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 STK17BO94768 372 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 ZNF134P52741 427 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 DMKNQ6E0U4 476 aaPredicted RBP5.85□□□□□ -1.47
NIPBL-208ENST00000514335 ATP6V0E2Q8NHE4 81 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 PIFOQ8TCI5 191 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 CLEC7AQ9BXN2 247 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 TMEM191AQ9H0A3 160 aa5.85□□□□□ -1.47
NIPBL-208ENST00000514335 NCBP2LA6PVI3 153 aaKnown RBP5.84□□□□□ -1.47
NIPBL-208ENST00000514335 HERV-K104P61576 105 aa5.84□□□□□ -1.47
NIPBL-208ENST00000514335 RPS4XP62701 263 aaKnown RBP5.84□□□□□ -1.47
NIPBL-208ENST00000514335 TFF2Q03403 129 aa5.84□□□□□ -1.47
NIPBL-208ENST00000514335 FOXF2Q12947 444 aa5.84□□□□□ -1.47
NIPBL-208ENST00000514335 LY6KQ17RY6 165 aa5.84□□□□□ -1.47
NIPBL-208ENST00000514335 GAGE13Q4V321 117 aa5.84□□□□□ -1.47
NIPBL-208ENST00000514335 STPG1Q5TH74 334 aa5.84□□□□□ -1.47
NIPBL-208ENST00000514335 GAGE2AQ6NT46 116 aa5.84□□□□□ -1.47
NIPBL-208ENST00000514335 BAGE3Q86Y29 109 aa5.84□□□□□ -1.47
NIPBL-208ENST00000514335 BAGE2Q86Y30 109 aa5.84□□□□□ -1.47
NIPBL-208ENST00000514335 SUMF1Q8NBK3 374 aa5.84□□□□□ -1.47
NIPBL-208ENST00000514335 OR2T10Q8NGZ9 312 aa5.84□□□□□ -1.47
NIPBL-208ENST00000514335 HHLA3Q9XRX5 114 aa5.84□□□□□ -1.47
NIPBL-208ENST00000514335 ABCA7Q8IZY2 2146 aa5.84□□□□□ -1.47
NIPBL-208ENST00000514335 IGKV6D-21A0A0A0MT36 114 aa5.84□□□□□ -1.48
NIPBL-208ENST00000514335 IL9P15248 144 aa5.84□□□□□ -1.48
NIPBL-208ENST00000514335 ICAM4Q14773 271 aa5.84□□□□□ -1.48
NIPBL-208ENST00000514335 SLC25A42Q86VD7 318 aa5.84□□□□□ -1.48
NIPBL-208ENST00000514335 PRIMA1Q86XR5 153 aa5.84□□□□□ -1.48
NIPBL-208ENST00000514335 ZNF442Q9H7R0 627 aa5.84□□□□□ -1.48
NIPBL-208ENST00000514335 SDF2L1Q9HCN8 221 aa5.84□□□□□ -1.48
NIPBL-208ENST00000514335 RNF7Q9UBF6 113 aa5.84□□□□□ -1.48
NIPBL-208ENST00000514335 BDP1A6H8Y1 2624 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 BAHCC1Q9P281 2608 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 FAM240AA0A1B0GVK7 77 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 DPM2O94777 84 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 PRH1P02810 166 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 HLA-DPB1P04440 258 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 ATP1B1P05026 303 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 ATP5G3P48201 142 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 KLF5Q13887 457 aaPredicted RBP5.83□□□□□ -1.48
NIPBL-208ENST00000514335 C2orf91Q6ZV80 131 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 ZNF441Q8N8Z8 693 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 LINC00526Q96FQ7 95 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 AQP10Q96PS8 301 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 DNAJB12Q9NXW2 375 aaKnown RBP5.83□□□□□ -1.48
NIPBL-208ENST00000514335 PHF3Q92576 2039 aaKnown RBP5.83□□□□□ -1.48
NIPBL-208ENST00000514335 TRAV26-2A0A0B4J265 109 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 M0R2P5 195 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 OVOL3O00110 214 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 CHEK1O14757 476 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 IGHV3-7P01780 117 aa5.83□□□□□ -1.48
NIPBL-208ENST00000514335 OR9G9P0C7N8 305 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms