RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 TREM1Q9NP99 234 aa-0.33□□□□□ -2.46
RNU4-55P-201ENST00000410731 ZNF106Q9H2Y7 1883 aaKnown RBP-0.33□□□□□ -2.46
RNU4-55P-201ENST00000410731 TPRP12270 2363 aaKnown RBP-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 ZNF736B4DX44 427 aaPredicted RBP-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 CCL25O15444 150 aa-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 COX6A1P12074 109 aa-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 ANGPT1Q15389 498 aa-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 GUK1Q16774 197 aa-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 RIC1Q4ADV7 1423 aa-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 TEX261Q6UWH6 196 aa-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 MCFD2Q8NI22 146 aa-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 C4orf3Q8WVX3 66 aa-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 CNBD2Q96M20 576 aa-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 KCTD7Q96MP8 289 aa-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 U3KQ87 197 aa-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 FLNCQ14315 2725 aa-0.34□□□□□ -2.46
RNU4-55P-201ENST00000410731 RALGAPA2Q2PPJ7 1873 aa-0.35□□□□□ -2.46
RNU4-55P-201ENST00000410731 ASH1LQ9NR48 2969 aaKnown RBP-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 A0A0J9YY10 115 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 A0A1B0GX78 115 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 OR2T8A6NH00 312 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 MAP2K4P45985 399 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 RHEBQ15382 184 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 KRTAP6-1Q3LI64 71 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 RNASE10Q5GAN6 216 aaKnown RBP-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 SPANXN3Q5MJ09 141 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 CST9Q5W186 159 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 IQCF2Q8IXL9 164 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 EXOC3-AS1Q8N2X6 119 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 ITFG2Q969R8 447 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 OPTNQ96CV9 577 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 DIRAS2Q96HU8 199 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 GINS4Q9BRT9 223 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 FAM96AQ9H5X1 160 aa-0.35□□□□□ -2.47
RNU4-55P-201ENST00000410731 ANK2Q01484 3957 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 RAD50Q92878 1312 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 DCCP43146 1447 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 CELSR1Q9NYQ6 3014 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 CCDC160A6NGH7 325 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 F5H768 121 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 SULT1B1O43704 296 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 HIST1H2BOP23527 126 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 HIST1H2BBP33778 126 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 HIST1H2BDP58876 126 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 HIST1H2BCP62807 126 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 RSU1Q15404 277 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 HIST2H2BEQ16778 126 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 SPRNQ5BIV9 151 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 RPL22L1Q6P5R6 122 aaKnown RBP-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 BPIFA4PQ86YQ2 179 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 DEFB125Q8N687 156 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 C3orf56Q8N813 242 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 OR5A1Q8NGJ0 315 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 ZNF75CPQ92670 426 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 HIST1H2BHQ93079 126 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 HIST1H2BNQ99877 126 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 HIST1H2BMQ99879 126 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 DCUN1D5Q9BTE7 237 aa-0.36□□□□□ -2.47
RNU4-55P-201ENST00000410731 PIEZO1Q92508 2521 aa-0.37□□□□□ -2.47
RNU4-55P-201ENST00000410731 ACOX3O15254 700 aa-0.37□□□□□ -2.47
RNU4-55P-201ENST00000410731 DNAL4O96015 105 aa-0.37□□□□□ -2.47
RNU4-55P-201ENST00000410731 GRK1Q15835 563 aa-0.37□□□□□ -2.47
RNU4-55P-201ENST00000410731 KHDC3LQ587J8 217 aa-0.37□□□□□ -2.47
RNU4-55P-201ENST00000410731 COMMD7Q86VX2 200 aa-0.37□□□□□ -2.47
RNU4-55P-201ENST00000410731 COMMD5Q9GZQ3 224 aa-0.37□□□□□ -2.47
RNU4-55P-201ENST00000410731 WDR61Q9GZS3 305 aaKnown RBP-0.37□□□□□ -2.47
RNU4-55P-201ENST00000410731 TLNRD1Q9H1K6 362 aa-0.37□□□□□ -2.47
RNU4-55P-201ENST00000410731 MAP1LC3AQ9H492 121 aa-0.37□□□□□ -2.47
RNU4-55P-201ENST00000410731 C15orf41Q9Y2V0 281 aa-0.37□□□□□ -2.47
RNU4-55P-201ENST00000410731 SCN3AQ9NY46 2000 aa-0.37□□□□□ -2.47
RNU4-55P-201ENST00000410731 ASCC3Q8N3C0 2202 aaKnown RBP-0.37□□□□□ -2.47
RNU4-55P-201ENST00000410731 TOPBP1Q92547 1522 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 DSTQ03001 7570 aaKnown RBP-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 TRPC5OSA6NMA1 111 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 SSNA1O43805 119 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 NDUFS6O75380 124 aaKnown RBP-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 OR2B3O76000 313 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 IGKV1-5P01602 117 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 MGST1P10620 155 aaKnown RBP-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 CASQ1P31415 396 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 HADHBP55084 474 aaKnown RBP-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 KRTAP26-1Q6PEX3 210 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 LINC00575Q6W349 94 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 LINC00322Q6ZN03 302 aaPredicted RBP-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 MIR17HGQ75NE6 70 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 CLVS1Q8IUQ0 354 aaPredicted RBP-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 OR10J5Q8NHC4 309 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 HS3ST2Q9Y278 367 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 OTOGQ6ZRI0 2925 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 CACNA1CQ13936 2221 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 DOCK3Q8IZD9 2030 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 MUC12Q9UKN1 5478 aa-0.38□□□□□ -2.47
RNU4-55P-201ENST00000410731 HMCN2Q8NDA2 5059 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 CASP8AP2Q9UKL3 1982 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 FABP12A6NFH5 140 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 IQCF5A8MTL0 148 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 INMT-MINDY4F8WBC2 141 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 K7EIL1 84 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 FAAHO00519 579 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms