RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 ACTL6BO94805 426 aa16.18■□□□□ 0.18
SOX2-201ENST00000325404 IGKV1-16P04430 117 aa16.18■□□□□ 0.18
SOX2-201ENST00000325404 CX3CL1P78423 397 aa16.18■□□□□ 0.18
SOX2-201ENST00000325404 TIGITQ495A1 244 aa16.18■□□□□ 0.18
SOX2-201ENST00000325404 MRPL52Q86TS9 123 aaKnown RBP16.18■□□□□ 0.18
SOX2-201ENST00000325404 GAL3ST2Q9H3Q3 398 aa16.18■□□□□ 0.18
SOX2-201ENST00000325404 PIEZO2Q9H5I5 2752 aa16.18■□□□□ 0.18
SOX2-201ENST00000325404 MMP23AO75900 390 aa16.17■□□□□ 0.18
SOX2-201ENST00000325404 C8orf88P0DMB2 117 aa16.17■□□□□ 0.18
SOX2-201ENST00000325404 CRYBB3P26998 211 aa16.17■□□□□ 0.18
SOX2-201ENST00000325404 UCNP55089 124 aa16.17■□□□□ 0.18
SOX2-201ENST00000325404 A0A1B0GUS0 222 aa16.17■□□□□ 0.18
SOX2-201ENST00000325404 FCN1O00602 326 aa16.17■□□□□ 0.18
SOX2-201ENST00000325404 LINC00310P59036 64 aa16.17■□□□□ 0.18
SOX2-201ENST00000325404 ALKBH2Q6NS38 261 aa16.17■□□□□ 0.18
SOX2-201ENST00000325404 FAM216BQ8N7L0 139 aa16.17■□□□□ 0.18
SOX2-201ENST00000325404 OR4A5Q8NH83 315 aa16.17■□□□□ 0.18
SOX2-201ENST00000325404 SLC25A33Q9BSK2 321 aa16.17■□□□□ 0.18
SOX2-201ENST00000325404 NDUFA4L2Q9NRX3 87 aa16.17■□□□□ 0.18
SOX2-201ENST00000325404 APOA2P02652 100 aa16.16■□□□□ 0.18
SOX2-201ENST00000325404 SAA1P0DJI8 122 aaPredicted RBP16.16■□□□□ 0.18
SOX2-201ENST00000325404 TMEM177Q53S58 311 aa16.16■□□□□ 0.18
SOX2-201ENST00000325404 ZNF714Q96N38 554 aa16.16■□□□□ 0.18
SOX2-201ENST00000325404 NKX6-3A6NJ46 265 aa16.16■□□□□ 0.18
SOX2-201ENST00000325404 DLL1O00548 723 aa16.16■□□□□ 0.18
SOX2-201ENST00000325404 NDUFB7P17568 137 aa16.16■□□□□ 0.18
SOX2-201ENST00000325404 CD40P25942 277 aa16.16■□□□□ 0.18
SOX2-201ENST00000325404 PPOXP50336 477 aa16.16■□□□□ 0.18
SOX2-201ENST00000325404 FAM71F2Q6NXP2 309 aa16.16■□□□□ 0.18
SOX2-201ENST00000325404 GFRALQ6UXV0 394 aa16.16■□□□□ 0.18
SOX2-201ENST00000325404 DOLPP1Q86YN1 238 aa16.16■□□□□ 0.18
SOX2-201ENST00000325404 DEFB108BQ8NET1 73 aa16.16■□□□□ 0.18
SOX2-201ENST00000325404 WFIKKN1Q96NZ8 548 aa16.16■□□□□ 0.18
SOX2-201ENST00000325404 GRIFINA4D1Z8 144 aa16.15■□□□□ 0.18
SOX2-201ENST00000325404 SNRPCP09234 159 aaKnown RBP16.15■□□□□ 0.18
SOX2-201ENST00000325404 FAM87AP0C7U9 286 aa16.15■□□□□ 0.18
SOX2-201ENST00000325404 IER3P46695 156 aa16.15■□□□□ 0.18
SOX2-201ENST00000325404 OR5AN1Q8NGI8 311 aa16.15■□□□□ 0.18
SOX2-201ENST00000325404 PSMB11A5LHX3 300 aa16.15■□□□□ 0.18
SOX2-201ENST00000325404 OR7C2O60412 319 aa16.15■□□□□ 0.18
SOX2-201ENST00000325404 ERHP84090 104 aaKnown RBP16.15■□□□□ 0.18
SOX2-201ENST00000325404 USF2Q15853 346 aaPredicted RBP16.15■□□□□ 0.18
SOX2-201ENST00000325404 TEX43Q6ZNM6 134 aa16.15■□□□□ 0.18
SOX2-201ENST00000325404 RAXQ9Y2V3 346 aa16.15■□□□□ 0.18
SOX2-201ENST00000325404 A0A1W2PN81 502 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 SNURFLB1AK76 121 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 GGTLC3B5MD39 225 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 SERF1AO75920 110 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 RNF224P0DH78 156 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 TNFRSF1AP19438 455 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 OR5I1Q13606 314 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 Q6ZWC4 215 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 OR8I2Q8N0Y5 310 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 C8orf31Q8N9H6 132 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 IGF2BP2-AS1Q96M15 143 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 C20orf144Q9BQM9 153 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 DSPP15924 2871 aaKnown RBP16.14■□□□□ 0.17
SOX2-201ENST00000325404 USF1P22415 310 aaPredicted RBP16.14■□□□□ 0.17
SOX2-201ENST00000325404 OR10J3Q5JRS4 329 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 MOB3BQ86TA1 216 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 SNRNP40Q96DI7 357 aaKnown RBP16.14■□□□□ 0.17
SOX2-201ENST00000325404 TBX15Q96SF7 602 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 COMMD5Q9GZQ3 224 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 IGF2RP11717 2491 aa16.14■□□□□ 0.17
SOX2-201ENST00000325404 H0YJW9 148 aa16.13■□□□□ 0.17
SOX2-201ENST00000325404 IGLV2-8P01709 118 aa16.13■□□□□ 0.17
SOX2-201ENST00000325404 RPL8P62917 257 aaKnown RBP16.13■□□□□ 0.17
SOX2-201ENST00000325404 VSTM2AQ8TAG5 236 aa16.13■□□□□ 0.17
SOX2-201ENST00000325404 SPTBN4Q9H254 2564 aa16.13■□□□□ 0.17
SOX2-201ENST00000325404 ATMQ13315 3056 aa16.13■□□□□ 0.17
SOX2-201ENST00000325404 NUTF2P61970 127 aaKnown RBP16.13■□□□□ 0.17
SOX2-201ENST00000325404 BAGE3Q86Y29 109 aa16.13■□□□□ 0.17
SOX2-201ENST00000325404 BAGE2Q86Y30 109 aa16.13■□□□□ 0.17
SOX2-201ENST00000325404 OR5AU1Q8NGC0 362 aa16.13■□□□□ 0.17
SOX2-201ENST00000325404 OR9G1Q8NH87 305 aa16.13■□□□□ 0.17
SOX2-201ENST00000325404 TMEM167AQ8TBQ9 72 aa16.13■□□□□ 0.17
SOX2-201ENST00000325404 ZNF596Q8TC21 504 aa16.13■□□□□ 0.17
SOX2-201ENST00000325404 FAM167A-AS1Q96KT0 104 aa16.13■□□□□ 0.17
SOX2-201ENST00000325404 SMIM27A0A1W2PRY6 76 aa16.12■□□□□ 0.17
SOX2-201ENST00000325404 M0R143 59 aa16.12■□□□□ 0.17
SOX2-201ENST00000325404 TPTE2P1Q5T6R2 138 aa16.12■□□□□ 0.17
SOX2-201ENST00000325404 ST6GALNAC3Q8NDV1 305 aa16.12■□□□□ 0.17
SOX2-201ENST00000325404 FAM122AQ96E09 287 aa16.12■□□□□ 0.17
SOX2-201ENST00000325404 DNAJC4Q9NNZ3 241 aa16.12■□□□□ 0.17
SOX2-201ENST00000325404 CDC42EP3Q9UKI2 254 aa16.12■□□□□ 0.17
SOX2-201ENST00000325404 ZNF705FA8MVS1 300 aaPredicted RBP16.12■□□□□ 0.17
SOX2-201ENST00000325404 ZNF705DP0CH99 300 aaPredicted RBP16.12■□□□□ 0.17
SOX2-201ENST00000325404 ZNF705BP0CI00 300 aaPredicted RBP16.12■□□□□ 0.17
SOX2-201ENST00000325404 TMEM136Q6ZRR5 245 aa16.12■□□□□ 0.17
SOX2-201ENST00000325404 LINC00311Q8N616 119 aa16.12■□□□□ 0.17
SOX2-201ENST00000325404 HARBI1Q96MB7 349 aa16.12■□□□□ 0.17
SOX2-201ENST00000325404 RBM14Q96PK6 669 aaKnown RBP16.12■□□□□ 0.17
SOX2-201ENST00000325404 MRPL20Q9BYC9 149 aaKnown RBP16.12■□□□□ 0.17
SOX2-201ENST00000325404 ZGRF1Q86YA3 2104 aa16.12■□□□□ 0.17
SOX2-201ENST00000325404 SUMO1P63165 101 aaKnown RBP16.11■□□□□ 0.17
SOX2-201ENST00000325404 PRR30Q53SZ7 412 aaPredicted RBP16.11■□□□□ 0.17
SOX2-201ENST00000325404 OR1L4Q8NGR5 311 aa16.11■□□□□ 0.17
SOX2-201ENST00000325404 TLN1Q9Y490 2541 aaKnown RBP16.11■□□□□ 0.17
SOX2-201ENST00000325404 A0A0G2JNJ9 132 aa16.11■□□□□ 0.17
SOX2-201ENST00000325404 RAB4AP20338 218 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms