RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 COL5A1-AS1Q5SY13 56 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 C1orf174Q8IYL3 243 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 NABP2Q9BQ15 211 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 CXXC4Q9H2H0 198 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 ABI3Q9P2A4 366 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 TRGV10A0A0A0MS01 117 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11□□□□□ -0.65
HDAC4-214ENST00000535493 A0A1W2PN81 502 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 CER1O95813 267 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 LINC00869P0C866 280 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 GABRA6Q16445 453 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 PRR27Q6MZM9 219 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 VHLLQ6RSH7 139 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 UNQ5815/PRO19632Q6UWF5 114 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 OR9G1Q8NH87 305 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 TANC2Q9HCD6 1990 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 BDP1A6H8Y1 2624 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 DSCAMO60469 2012 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 DYSFO75923 2080 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 OR5G3P0C626 314 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 PRB4P10163 310 aaPredicted RBP10.99□□□□□ -0.65
HDAC4-214ENST00000535493 CTRLP40313 264 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 LOXL3P58215 753 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 CX3CL1P78423 397 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 IBA57Q5T440 356 aaKnown RBP10.99□□□□□ -0.65
HDAC4-214ENST00000535493 NIT1Q86X76 327 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 LYG1Q8N1E2 194 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 DEFB108BQ8NET1 73 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 RNF2Q99496 336 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 GNB1LQ9BYB4 327 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 PLEKHA3Q9HB20 300 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 CDC42EP3Q9UKI2 254 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 RELNP78509 3460 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 PCNX1Q96RV3 2341 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 DPRXA6NFQ7 191 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 KLRC4-KLRK1H3BQV0 150 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 IGKV1-16P04430 117 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 ADH4P08319 380 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 CECR9P0C854 216 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 MSMPQ1L6U9 139 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 OR10W1Q8NGF6 305 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 TSKUQ8WUA8 353 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 ST6GALNAC6Q969X2 333 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 KCNS1Q96KK3 526 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 ZNF355PQ9NSJ1 428 aa10.99□□□□□ -0.65
HDAC4-214ENST00000535493 SAA2-SAA4A0A096LPE2 208 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 ZNF324O75467 553 aaPredicted RBP10.98□□□□□ -0.65
HDAC4-214ENST00000535493 SAA2P0DJI9 122 aaPredicted RBP10.98□□□□□ -0.65
HDAC4-214ENST00000535493 IGLC2P0DOY2 106 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 IGLC3P0DOY3 106 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 TIGITQ495A1 244 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 CT45A1Q5HYN5 189 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 FAM90A1Q86YD7 464 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 CT45A3Q8NHU0 189 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 RND1Q92730 232 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 SNRNP40Q96DI7 357 aaKnown RBP10.98□□□□□ -0.65
HDAC4-214ENST00000535493 CLEC7AQ9BXN2 247 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 IGLV2-8P01709 118 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 HNRNPA3P51991 378 aaKnown RBP10.98□□□□□ -0.65
HDAC4-214ENST00000535493 TMPRSS3P57727 454 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 RELQ04864 619 aaPredicted RBP10.98□□□□□ -0.65
HDAC4-214ENST00000535493 GAGE1Q13065 139 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 Q56UQ5 140 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 TCTEX1D1Q8N7M0 179 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 OR4B1Q8NGF8 309 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 ENY2Q9NPA8 101 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 IL19Q9UHD0 177 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 ZFP30Q9Y2G7 519 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 LAMTOR2Q9Y2Q5 125 aa10.98□□□□□ -0.65
HDAC4-214ENST00000535493 C15orf61A6NNL5 157 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 C9JCJ5 164 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 M0QZ24 198 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 CCL25O15444 150 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 PLAUP00749 431 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 CAMPP49913 170 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 PRR20EP86478 221 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 PRR20CP86479 221 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 PRR20DP86480 221 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 PRR20BP86481 221 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 PRR20AP86496 221 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 KIR3DL3Q8N743 410 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 WDR31Q8NA23 367 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 TXNDC17Q9BRA2 123 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 SH2D7A6NKC9 451 aaPredicted RBP10.97□□□□□ -0.65
HDAC4-214ENST00000535493 SRRM4A7MD48 611 aaKnown RBP10.97□□□□□ -0.65
HDAC4-214ENST00000535493 TNFSF15O95150 251 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 MT-CO2P00403 227 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 PYYP10082 97 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 RPL8P62917 257 aaKnown RBP10.97□□□□□ -0.65
HDAC4-214ENST00000535493 SSBP2P81877 361 aaPredicted RBP10.97□□□□□ -0.65
HDAC4-214ENST00000535493 RAB31Q13636 194 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 TNXAQ16473 311 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 C11orf52Q96A22 123 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 TECRQ9NZ01 308 aaKnown RBP10.97□□□□□ -0.65
HDAC4-214ENST00000535493 CLCF1Q9UBD9 225 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 TECTAO75443 2155 aa10.97□□□□□ -0.65
HDAC4-214ENST00000535493 MMP23AO75900 390 aa10.96□□□□□ -0.65
HDAC4-214ENST00000535493 AREGP15514 252 aa10.96□□□□□ -0.65
HDAC4-214ENST00000535493 USF1P22415 310 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms