RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 HRNRQ86YZ3 2850 aaPredicted RBP-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 A0A0D9SG42 100 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 TMEM213A2RRL7 107 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 ZNF879B4DU55 563 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 SMLR1H3BR10 107 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 GOLGA8MH3BSY2 632 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 KCNK1O00180 336 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 HLA-DRAP01903 254 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 FAM228BP0C875 321 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 MIFP14174 115 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 KCNE1P15382 129 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 FABP9Q0Z7S8 132 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 SPANXN5Q5MJ07 72 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 SDHAF4Q5VUM1 108 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 CNPY4Q8N129 248 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 DHRS9Q9BPW9 319 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 FKBP14Q9NWM8 211 aa-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 NSD1Q96L73 2696 aaPredicted RBP-0.27□□□□□ -2.45
RNU4-55P-201ENST00000410731 MACF1Q9UPN3 7388 aaKnown RBP-0.28□□□□□ -2.45
RNU4-55P-201ENST00000410731 MCM3APO60318 1980 aa-0.28□□□□□ -2.45
RNU4-55P-201ENST00000410731 IGF2RP11717 2491 aa-0.28□□□□□ -2.45
RNU4-55P-201ENST00000410731 SPI1P17947 270 aa-0.28□□□□□ -2.45
RNU4-55P-201ENST00000410731 MPV17LQ2QL34 196 aa-0.28□□□□□ -2.45
RNU4-55P-201ENST00000410731 SOSTDC1Q6X4U4 206 aa-0.28□□□□□ -2.45
RNU4-55P-201ENST00000410731 GPR32P1Q8NGA4 272 aa-0.28□□□□□ -2.45
RNU4-55P-201ENST00000410731 C19orf60Q96EN9 201 aa-0.28□□□□□ -2.45
RNU4-55P-201ENST00000410731 EFCAB1Q9HAE3 211 aa-0.28□□□□□ -2.45
RNU4-55P-201ENST00000410731 POLR1DQ9Y2S0 133 aa-0.28□□□□□ -2.45
RNU4-55P-201ENST00000410731 E9PCH4 1651 aa-0.28□□□□□ -2.45
RNU4-55P-201ENST00000410731 MAST2Q6P0Q8 1798 aa-0.29□□□□□ -2.46
RNU4-55P-201ENST00000410731 REG1AP05451 166 aa-0.29□□□□□ -2.46
RNU4-55P-201ENST00000410731 CDC34P49427 236 aaPredicted RBP-0.29□□□□□ -2.46
RNU4-55P-201ENST00000410731 CCL20P78556 96 aa-0.29□□□□□ -2.46
RNU4-55P-201ENST00000410731 CAV1Q03135 178 aa-0.29□□□□□ -2.46
RNU4-55P-201ENST00000410731 SPINK9Q5DT21 86 aa-0.29□□□□□ -2.46
RNU4-55P-201ENST00000410731 GLT8D1Q68CQ7 371 aa-0.29□□□□□ -2.46
RNU4-55P-201ENST00000410731 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.29□□□□□ -2.46
RNU4-55P-201ENST00000410731 OR11H6Q8NGC7 330 aa-0.29□□□□□ -2.46
RNU4-55P-201ENST00000410731 PFN4Q8NHR9 129 aa-0.29□□□□□ -2.46
RNU4-55P-201ENST00000410731 CDC42SE1Q9NRR8 79 aa-0.29□□□□□ -2.46
RNU4-55P-201ENST00000410731 DKKL1Q9UK85 242 aa-0.29□□□□□ -2.46
RNU4-55P-201ENST00000410731 DENND4CQ5VZ89 1909 aa-0.29□□□□□ -2.46
RNU4-55P-201ENST00000410731 CEP192Q8TEP8 1941 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 CCDC88AQ3V6T2 1871 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 HPGDSO60760 199 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 UBL3O95164 117 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 BAALC-AS2P0C853 105 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 PET100P0DJ07 73 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 CRYGAP11844 174 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 SPINK7P58062 85 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 RHOGP84095 191 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 PMS2P3Q13401 168 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 AADACL4Q5VUY2 407 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 GKN2Q86XP6 184 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 OR2T4Q8NH00 348 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 SFT2D1Q8WV19 159 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 SMIM19Q96E16 107 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 HDHD2Q9H0R4 259 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 OR51I2Q9H344 312 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 RASL12Q9NYN1 266 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 TAS2R4Q9NYW5 299 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 BDP1A6H8Y1 2624 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 ABCA4P78363 2273 aa-0.3□□□□□ -2.46
RNU4-55P-201ENST00000410731 A0A0D9SG52 128 aa-0.31□□□□□ -2.46
RNU4-55P-201ENST00000410731 BIRC5O15392 142 aa-0.31□□□□□ -2.46
RNU4-55P-201ENST00000410731 UGT2B7P16662 529 aa-0.31□□□□□ -2.46
RNU4-55P-201ENST00000410731 SSR2P43308 183 aa-0.31□□□□□ -2.46
RNU4-55P-201ENST00000410731 PSG9Q00887 426 aa-0.31□□□□□ -2.46
RNU4-55P-201ENST00000410731 C1orf137Q5JT78 98 aa-0.31□□□□□ -2.46
RNU4-55P-201ENST00000410731 TMEM161BQ8NDZ6 487 aa-0.31□□□□□ -2.46
RNU4-55P-201ENST00000410731 TSKUQ8WUA8 353 aa-0.31□□□□□ -2.46
RNU4-55P-201ENST00000410731 SCGB3A1Q96QR1 104 aa-0.31□□□□□ -2.46
RNU4-55P-201ENST00000410731 PRRT1Q99946 306 aa-0.31□□□□□ -2.46
RNU4-55P-201ENST00000410731 MIXL1Q9H2W2 232 aa-0.31□□□□□ -2.46
RNU4-55P-201ENST00000410731 ANKRD17O75179 2603 aaKnown RBP-0.31□□□□□ -2.46
RNU4-55P-201ENST00000410731 MTUS2Q5JR59 1369 aa-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 UBR5O95071 2799 aaPredicted RBP-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 TRAV12-1A0A0B4J245 112 aa-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 TRAV1-1A0A0B4J248 108 aa-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 LINC00854A0A1B0GVQ3 168 aa-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 TPM1P09493 284 aa-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 MAP3K7CLP57077 242 aa-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 IFITM2Q01629 132 aa-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 PPP1R1AQ13522 171 aa-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 BATFQ16520 125 aa-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 LPCAT4Q643R3 524 aa-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 SLC51BQ86UW2 128 aa-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 DERL1Q9BUN8 251 aa-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 ULBP3Q9BZM4 244 aa-0.32□□□□□ -2.46
RNU4-55P-201ENST00000410731 HIVEP3Q5T1R4 2406 aa-0.33□□□□□ -2.46
RNU4-55P-201ENST00000410731 TRBV20OR9-2A0A075B6H5 130 aa-0.33□□□□□ -2.46
RNU4-55P-201ENST00000410731 YKT6O15498 198 aa-0.33□□□□□ -2.46
RNU4-55P-201ENST00000410731 LYZL6O75951 148 aa-0.33□□□□□ -2.46
RNU4-55P-201ENST00000410731 AADACL3Q5VUY0 350 aa-0.33□□□□□ -2.46
RNU4-55P-201ENST00000410731 DPPA3Q6W0C5 159 aa-0.33□□□□□ -2.46
RNU4-55P-201ENST00000410731 Q8N402 240 aa-0.33□□□□□ -2.46
RNU4-55P-201ENST00000410731 TMEM156Q8N614 296 aa-0.33□□□□□ -2.46
RNU4-55P-201ENST00000410731 OR4E2Q8NGC2 313 aa-0.33□□□□□ -2.46
RNU4-55P-201ENST00000410731 NABP2Q9BQ15 211 aa-0.33□□□□□ -2.46
RNU4-55P-201ENST00000410731 TMEM147Q9BVK8 224 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms