RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 TFPI2P48307 235 aa12.91□□□□□ -0.34
ARHGEF40-202ENST00000553709 ZNF502Q8TBZ5 544 aa12.91□□□□□ -0.34
ARHGEF40-202ENST00000553709 CGAP01215 116 aa12.91□□□□□ -0.34
ARHGEF40-202ENST00000553709 STAG3L2P0CL84 134 aa12.91□□□□□ -0.34
ARHGEF40-202ENST00000553709 TEX29Q8N6K0 151 aa12.91□□□□□ -0.34
ARHGEF40-202ENST00000553709 MYLKQ15746 1914 aa12.91□□□□□ -0.34
ARHGEF40-202ENST00000553709 GPX4P36969 197 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF40-202ENST00000553709 FAM90A1Q86YD7 464 aa12.91□□□□□ -0.34
ARHGEF40-202ENST00000553709 SDK2Q58EX2 2172 aa12.91□□□□□ -0.34
ARHGEF40-202ENST00000553709 IL4P05112 153 aa12.91□□□□□ -0.34
ARHGEF40-202ENST00000553709 C2orf83Q53S99 150 aa12.91□□□□□ -0.34
ARHGEF40-202ENST00000553709 RAB9AP51151 201 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 SLC25A34Q6PIV7 304 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 OR1N2Q8NGR9 330 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 SDF2L1Q9HCN8 221 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 CACNA1EQ15878 2313 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 APOBEC3AP31941 199 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 CX3CL1P78423 397 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 ZNF600Q6ZNG1 722 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 OR10AG1Q8NH19 301 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 MESP1Q9BRJ9 268 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 CBLN4Q9NTU7 201 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 AREGP15514 252 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 HBBP68871 147 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 KLRB1Q12918 225 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 GTF3AQ92664 365 aaKnown RBP12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 IL36BQ9NZH7 164 aa12.9□□□□□ -0.34
ARHGEF40-202ENST00000553709 HLA-DRB1P01911 266 aa12.89□□□□□ -0.35
ARHGEF40-202ENST00000553709 SOD3P08294 240 aa12.89□□□□□ -0.35
ARHGEF40-202ENST00000553709 CFHR1Q03591 330 aa12.89□□□□□ -0.35
ARHGEF40-202ENST00000553709 OTX1P32242 354 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF40-202ENST00000553709 TCF24Q7RTU0 167 aa12.89□□□□□ -0.35
ARHGEF40-202ENST00000553709 DEPPQ9NTK1 212 aa12.89□□□□□ -0.35
ARHGEF40-202ENST00000553709 SCO2A0A1W2PP80 73 aa12.89□□□□□ -0.35
ARHGEF40-202ENST00000553709 FGF16O43320 207 aa12.89□□□□□ -0.35
ARHGEF40-202ENST00000553709 UQCRFS1P47985 274 aa12.89□□□□□ -0.35
ARHGEF40-202ENST00000553709 ATP5G3P48201 142 aa12.89□□□□□ -0.35
ARHGEF40-202ENST00000553709 NBEAP1P0C6P0 100 aa12.89□□□□□ -0.35
ARHGEF40-202ENST00000553709 TUBA4BQ9H853 241 aa12.89□□□□□ -0.35
ARHGEF40-202ENST00000553709 GVINP1Q7Z2Y8 2422 aa12.89□□□□□ -0.35
ARHGEF40-202ENST00000553709 IGKV1D-8A0A087WSZ0 117 aa12.88□□□□□ -0.35
ARHGEF40-202ENST00000553709 RELQ04864 619 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF40-202ENST00000553709 SYT8Q8NBV8 401 aa12.88□□□□□ -0.35
ARHGEF40-202ENST00000553709 KIF26BQ2KJY2 2108 aa12.88□□□□□ -0.35
ARHGEF40-202ENST00000553709 SLC17A3O00476 420 aa12.88□□□□□ -0.35
ARHGEF40-202ENST00000553709 EFNA2O43921 213 aa12.88□□□□□ -0.35
ARHGEF40-202ENST00000553709 SRSF3P84103 164 aaKnown RBP12.88□□□□□ -0.35
ARHGEF40-202ENST00000553709 PHLDA3Q9Y5J5 127 aa12.88□□□□□ -0.35
ARHGEF40-202ENST00000553709 ATP5G2Q06055 141 aa12.88□□□□□ -0.35
ARHGEF40-202ENST00000553709 C9orf106Q8NAJ2 232 aa12.88□□□□□ -0.35
ARHGEF40-202ENST00000553709 LINC01560Q8TB33 94 aa12.88□□□□□ -0.35
ARHGEF40-202ENST00000553709 CEACAM1P13688 526 aa12.88□□□□□ -0.35
ARHGEF40-202ENST00000553709 MEF2CQ06413 473 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF40-202ENST00000553709 CRYGSP22914 178 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 RTTNQ86VV8 2226 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 TRAV24A0A0B4J272 114 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 NUDT3O95989 172 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 ZNF497Q6ZNH5 498 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 H3BVH4 76 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 ZFP36L1Q07352 338 aaKnown RBP12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 ICAM4Q14773 271 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 SAPCD1Q5SSQ6 148 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 TMEM238LA0A1B0GVL6 79 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 GAGE10A6NGK3 116 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 A6NJY4 79 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 NPPCP23582 126 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 ID3Q02535 119 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 PIMREGQ9BSJ6 248 aa12.87□□□□□ -0.35
ARHGEF40-202ENST00000553709 ATOH7Q8N100 152 aa12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 CACNG8Q8WXS5 425 aa12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 MRPL20Q9BYC9 149 aaKnown RBP12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 FBXL15Q9H469 300 aa12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 C9orf172C9J069 976 aa12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 ZIC4Q8N9L1 334 aa12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 EEF1AKMT3Q96AZ1 226 aa12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 FOXD3Q9UJU5 478 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 LINC00312Q9Y6C7 94 aa12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 PEX7O00628 323 aa12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 FAM106AQ4KMX7 169 aa12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 MBNL2Q5VZF2 373 aaKnown RBP12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 REC114Q7Z4M0 266 aa12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 IGHV3-35A0A0C4DH35 117 aa12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 BSPH1Q075Z2 132 aa12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 FAM53AQ6NSI3 398 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 LTBP2Q14767 1821 aa12.86□□□□□ -0.35
ARHGEF40-202ENST00000553709 FBLL1A6NHQ2 334 aaKnown RBP12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 MIR17HGQ75NE6 70 aa12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 FAM57AQ8TBR7 257 aa12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 DPM3Q9P2X0 92 aa12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 CEP250Q9BV73 2442 aa12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 RALGAPA1Q6GYQ0 2036 aa12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 FGFBP3Q8TAT2 258 aa12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 YPEL1O60688 119 aa12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 FABP2P12104 132 aa12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 FOXA3P55318 350 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 RPL23P62829 140 aaKnown RBP12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 LRTM2Q8N967 370 aa12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 OR4D5Q8NGN0 318 aa12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 YPEL2Q96QA6 119 aa12.85□□□□□ -0.35
ARHGEF40-202ENST00000553709 NOTCH4Q99466 2003 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms