RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 RELBQ01201 579 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 SPRNQ5BIV9 151 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 C11orf42Q8N5U0 333 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 STPG4Q8N801 248 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 CDX2Q99626 313 aaPredicted RBP11.05□□□□□ -0.64
HDAC4-214ENST00000535493 HES4Q9HCC6 221 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 ZNRD1Q9P1U0 126 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 TCF19Q9Y242 345 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 PTPRBP23467 1997 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 ZZEF1O43149 2961 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 SIAH2O43255 324 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 SPINT2O43291 252 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 ZNF253O75346 499 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 RANP62826 216 aaKnown RBP11.05□□□□□ -0.64
HDAC4-214ENST00000535493 MRPL49Q13405 166 aaKnown RBP11.05□□□□□ -0.64
HDAC4-214ENST00000535493 SPATA45Q537H7 98 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 Q8N976 141 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 FAM168AQ92567 244 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 NAV3Q8IVL0 2385 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 HELTA6NFD8 242 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 C15orf65H3BRN8 121 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 GNG4P50150 75 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 RAB7AP51149 207 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 ZNF83P51522 516 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 MRPS11P82912 194 aaKnown RBP11.04□□□□□ -0.64
HDAC4-214ENST00000535493 LRRC29Q8WV35 223 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 NPVFQ9HCQ7 196 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 EP300Q09472 2414 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-214ENST00000535493 A0A1W2PS18 150 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 IQCF6A8MYZ5 107 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 OR7C2O60412 319 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 CA2P00918 260 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 IGHV3-48P01763 117 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 DUSP3P51452 185 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-214ENST00000535493 MORN2Q502X0 79 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 TEPPQ6URK8 271 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 ZNF318Q5VUA4 2279 aa11.04□□□□□ -0.64
HDAC4-214ENST00000535493 CNOT1A5YKK6 2376 aaKnown RBP11.03□□□□□ -0.64
HDAC4-214ENST00000535493 A8MXE2 369 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 M0QZK8 103 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 SP1P08047 785 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 SUMO1P63165 101 aaKnown RBP11.03□□□□□ -0.64
HDAC4-214ENST00000535493 ERASQ7Z444 233 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 STARD4Q96DR4 205 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 DNAJC4Q9NNZ3 241 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 CHRNB4P30926 498 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 PRDX2P32119 198 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 ERVK-16P61578 105 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 DUX4L9Q6RFH8 374 aaPredicted RBP11.03□□□□□ -0.64
HDAC4-214ENST00000535493 Q6ZN92 141 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 LHFPL4Q7Z7J7 247 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 SGK494Q96LW2 274 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 S1PR3Q99500 378 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 TXN2Q99757 166 aa11.03□□□□□ -0.64
HDAC4-214ENST00000535493 LSM4Q9Y4Z0 139 aaKnown RBP11.03□□□□□ -0.64
HDAC4-214ENST00000535493 IGKV1OR2-108A0A075B7D4 117 aa11.02□□□□□ -0.64
HDAC4-214ENST00000535493 SFTPCP11686 197 aa11.02□□□□□ -0.64
HDAC4-214ENST00000535493 RHOBP62745 196 aa11.02□□□□□ -0.64
HDAC4-214ENST00000535493 OR2Z1Q8NG97 314 aa11.02□□□□□ -0.64
HDAC4-214ENST00000535493 DCAF16Q9NXF7 216 aa11.02□□□□□ -0.64
HDAC4-214ENST00000535493 OPN3Q9H1Y3 402 aaPredicted RBP11.02□□□□□ -0.65
HDAC4-214ENST00000535493 ZNF586Q9NXT0 402 aa11.02□□□□□ -0.65
HDAC4-214ENST00000535493 POLEQ07864 2286 aa11.02□□□□□ -0.65
HDAC4-214ENST00000535493 PKDREJQ9NTG1 2253 aa11.02□□□□□ -0.65
HDAC4-214ENST00000535493 IGKV1D-17A0A075B6S4 117 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 TRAV5A0A0B4J249 113 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 MPDU1O75352 247 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 C3orf79P0CE67 100 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 NPY1RP25929 384 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 PCP4P48539 62 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 HINT1P49773 126 aaPredicted RBP11.01□□□□□ -0.65
HDAC4-214ENST00000535493 HES3Q5TGS1 186 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 MORN5Q5VZ52 161 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 TRGV5A0A0B4J1U4 118 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 GGTLC3B5MD39 225 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 BMPR1BO00238 502 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 NDUFB8O95169 186 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 GPR6P46095 362 aaPredicted RBP11.01□□□□□ -0.65
HDAC4-214ENST00000535493 VWA1Q6PCB0 445 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 TMEM136Q6ZRR5 245 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 SLC24A4Q8NFF2 622 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 ZNF503Q96F45 646 aa11.01□□□□□ -0.65
HDAC4-214ENST00000535493 HYPMO75409 117 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 CD24P25063 80 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 GNG10P50151 68 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 RPP30P78346 268 aaKnown RBP11□□□□□ -0.65
HDAC4-214ENST00000535493 SLAQ13239 276 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 SMIM21Q3B7S5 101 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 OR4A47Q6IF82 309 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 FAM214BQ7L5A3 538 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 GMPPAQ96IJ6 420 aaPredicted RBP11□□□□□ -0.65
HDAC4-214ENST00000535493 SLC35E1Q96K37 410 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 TRIB1Q96RU8 372 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 SSBP4Q9BWG4 385 aaPredicted RBP11□□□□□ -0.65
HDAC4-214ENST00000535493 SFXN3Q9BWM7 321 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 IFI27L2Q9H2X8 130 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 ESDP10768 282 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 CD46P15529 392 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 Q0VG73 95 aa11□□□□□ -0.65
HDAC4-214ENST00000535493 TMEM249Q2WGJ8 235 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms