RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 RBM14Q96PK6 669 aaKnown RBP11.1□□□□□ -0.63
HDAC4-214ENST00000535493 MIEN1Q9BRT3 115 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 WNT10AQ9GZT5 417 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 GNB4Q9HAV0 340 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 GNG12Q9UBI6 72 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 SVEP1Q4LDE5 3571 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 COMPP49747 757 aaPredicted RBP11.1□□□□□ -0.63
HDAC4-214ENST00000535493 ATP1A1-AS1Q5TC04 95 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 Q8IYB0 196 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 FOXJ2Q9P0K8 574 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 PCNX2A6NKB5 2137 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 TNFSF13O75888 250 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 CD99P14209 185 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 GPR12P47775 334 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 ZNF134P52741 427 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 RNFT1Q5M7Z0 435 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 TDHQ8IZJ6 230 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 NAT8BQ9UHF3 227 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 MRPS18CQ9Y3D5 142 aaKnown RBP11.09□□□□□ -0.63
HDAC4-214ENST00000535493 GCHFRP30047 84 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 MEOX1P50221 254 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 EFNB3Q15768 340 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 MAJINQ3KP22 176 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 MRPL54Q6P161 138 aaKnown RBP11.09□□□□□ -0.63
HDAC4-214ENST00000535493 TEX43Q6ZNM6 134 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 FAM216AQ8WUB2 273 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 UHRF2Q96PU4 802 aa11.09□□□□□ -0.63
HDAC4-214ENST00000535493 PLCE1Q9P212 2302 aa11.08□□□□□ -0.63
HDAC4-214ENST00000535493 IGHV3OR15-7A0A075B7D8 119 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 GFRA3O60609 400 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 CXorf1O96002 111 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 IL6RP08887 468 aaPredicted RBP11.08□□□□□ -0.64
HDAC4-214ENST00000535493 OR10J4P0C629 311 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 CRYBB3P26998 211 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 DUTP33316 252 aaKnown RBP11.08□□□□□ -0.64
HDAC4-214ENST00000535493 PQLC2Q6ZP29 291 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 MIR17HGQ75NE6 70 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 STPG3Q8N7X2 389 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 TAAR6Q96RI8 345 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 IL36BQ9NZH7 164 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 TBL2Q9Y4P3 447 aaKnown RBP11.08□□□□□ -0.64
HDAC4-214ENST00000535493 UBE2NP61088 152 aaKnown RBP11.08□□□□□ -0.64
HDAC4-214ENST00000535493 TMEM183BQ1AE95 376 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 ZBTB34Q8NCN2 500 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 IGFBP2P18065 325 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 AMTP48728 403 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 HTD2P86397 168 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 TRA2AQ13595 282 aaKnown RBP eCLIP11.08□□□□□ -0.64
HDAC4-214ENST00000535493 MLANAQ16655 118 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 ZNF718Q3SXZ3 478 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 WDR82Q6UXN9 313 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 ACP7Q6ZNF0 438 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 SIGLECL1Q8N7X8 197 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 GCM1Q9NP62 436 aa11.08□□□□□ -0.64
HDAC4-214ENST00000535493 TPRP12270 2363 aaKnown RBP11.07□□□□□ -0.64
HDAC4-214ENST00000535493 DIRC3C9JPN6 131 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 TCF21O43680 179 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 NTF3P20783 257 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 IGHV1-2P23083 117 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 OPRK1P41145 380 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 LGALS4P56470 323 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 CD177Q8N6Q3 437 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 ZNRF1Q8ND25 227 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 EAF1Q96JC9 268 aaPredicted RBP11.07□□□□□ -0.64
HDAC4-214ENST00000535493 HSD17B10Q99714 261 aaKnown RBP11.07□□□□□ -0.64
HDAC4-214ENST00000535493 GVINP1Q7Z2Y8 2422 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 PLXNB1O43157 2135 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 SELENOTP62341 195 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 PSG5Q15238 335 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 CENPWQ5EE01 88 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 SLC35E4Q6ICL7 350 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 RAB1CQ92928 201 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 LINC00479Q96M42 142 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 SERTAD4Q9NUC0 356 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 SPRR3Q9UBC9 169 aa11.07□□□□□ -0.64
HDAC4-214ENST00000535493 YLPM1P49750 1951 aaKnown RBP11.06□□□□□ -0.64
HDAC4-214ENST00000535493 C9orf172C9J069 976 aa11.06□□□□□ -0.64
HDAC4-214ENST00000535493 FAM201AQ5SY85 155 aa11.06□□□□□ -0.64
HDAC4-214ENST00000535493 LCN12Q6JVE5 192 aa11.06□□□□□ -0.64
HDAC4-214ENST00000535493 CNEP1R1Q8N9A8 125 aa11.06□□□□□ -0.64
HDAC4-214ENST00000535493 SSBP3Q9BWW4 388 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-214ENST00000535493 TMEM140Q9NV12 185 aa11.06□□□□□ -0.64
HDAC4-214ENST00000535493 A0A1W2PNU3 283 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-214ENST00000535493 TIMM8AO60220 97 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-214ENST00000535493 MGST1P10620 155 aaKnown RBP11.06□□□□□ -0.64
HDAC4-214ENST00000535493 VDAC2P45880 294 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-214ENST00000535493 PAFAH1B2P68402 229 aa11.06□□□□□ -0.64
HDAC4-214ENST00000535493 RPEL1Q2QD12 228 aa11.06□□□□□ -0.64
HDAC4-214ENST00000535493 INTS1Q8N201 2190 aaKnown RBP11.06□□□□□ -0.64
HDAC4-214ENST00000535493 NANOS1Q8WY41 292 aaKnown RBP11.06□□□□□ -0.64
HDAC4-214ENST00000535493 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
HDAC4-214ENST00000535493 NRN1Q9NPD7 142 aa11.06□□□□□ -0.64
HDAC4-214ENST00000535493 TUBG2Q9NRH3 451 aa11.06□□□□□ -0.64
HDAC4-214ENST00000535493 TP73-AS1Q9UF72 201 aa11.06□□□□□ -0.64
HDAC4-214ENST00000535493 DUSP13Q9UII6 198 aa11.06□□□□□ -0.64
HDAC4-214ENST00000535493 V9GYV3 84 aa11.06□□□□□ -0.64
HDAC4-214ENST00000535493 PRSS46E5RG02 174 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 GPX1P07203 203 aa11.05□□□□□ -0.64
HDAC4-214ENST00000535493 SRIP30626 198 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms