RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 FXYD6-FXYD2A0A087WZ82 144 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 ZNF816-ZNF321PA0A0X1KG74 233 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 KANTRA0A1W2PQU2 76 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 OR2T8A6NH00 312 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 CD300LBA8K4G0 201 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 C9JAW5 83 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 C9JQL5 133 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 CCDC179H3BU77 68 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 SIRPB1O00241 398 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 TAAR5O14804 337 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 ENSAO43768 121 aaKnown RBP3.17□□□□□ -1.9
NIPBL-207ENST00000513819 HYPMO75409 117 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 SERF1AO75920 110 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 OXTP01178 125 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 IGHV3-23P01764 117 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 P04436 131 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 SPINK8P0C7L1 97 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 SLC25A4P12235 298 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 HIST1H1DP16402 221 aaKnown RBP3.17□□□□□ -1.9
NIPBL-207ENST00000513819 G6PCP35575 357 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 GUCA1AP43080 201 aaPredicted RBP3.17□□□□□ -1.9
NIPBL-207ENST00000513819 LCN6P62502 163 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 SLC35B1P78383 322 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 GINS1Q14691 196 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 PMVKQ15126 192 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 SPANXN3Q5MJ09 141 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 SBSNQ6UWP8 590 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 Q6ZN92 141 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 SLC35F2Q8IXU6 374 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 OR51A4Q8NGJ6 313 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 OR5AK2Q8NH90 309 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 MFSD8Q8NHS3 518 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 ZNF675Q8TD23 568 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 ACER1Q8TDN7 264 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 RXFP2Q8WXD0 754 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 NEIL2Q969S2 332 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 LRRC58Q96CX6 371 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 MS4A6EQ96DS6 147 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 LINC00477Q96M19 166 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 GABRG3Q99928 467 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 ZNF471Q9BX82 626 aaPredicted RBP3.17□□□□□ -1.9
NIPBL-207ENST00000513819 SLC17A9Q9BYT1 436 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 FXYD6Q9H0Q3 95 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 OR2D2Q9H210 308 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 MS4A6AQ9H2W1 248 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 SMDT1Q9H4I9 107 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 ACP6Q9NPH0 428 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 TMEM9BQ9NQ34 198 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 PRNDQ9UKY0 176 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 HIGD1AQ9Y241 93 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 IER3IP1Q9Y5U9 82 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 ZNF780BQ9Y6R6 833 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 USP32Q8NFA0 1604 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 CPS1P31327 1500 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 SHPRHQ149N8 1683 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 A2ML1A8K2U0 1454 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 COL2A1P02458 1487 aaPredicted RBP3.16□□□□□ -1.9
NIPBL-207ENST00000513819 TSPOAP1O95153 1857 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 MYO3AQ8NEV4 1616 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 ALKQ9UM73 1620 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 LRRK1Q38SD2 2015 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 PPLO60437 1756 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 DLC1Q96QB1 1528 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 TRAV8-6A0A0B4J262 113 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 A0A0D9SFI3 127 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 K7N7A8 449 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 XKRYO14609 159 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 GEMIN2O14893 280 aaKnown RBP3.16□□□□□ -1.9
NIPBL-207ENST00000513819 TBL1XO60907 577 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 CLDN11O75508 207 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 PGA4P0DJD7 388 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 PGA5P0DJD9 388 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 CD99P14209 185 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 NTF3P20783 257 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 AQP1P29972 269 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 OR1E2P47887 323 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 HINT1P49773 126 aaPredicted RBP3.16□□□□□ -1.9
NIPBL-207ENST00000513819 EMP1P54849 157 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 CLDN6P56747 220 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 GNG5P63218 68 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 KLRD1Q13241 179 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 PPP1R1AQ13522 171 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 HLA-DRB5Q30154 266 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 C9orf129Q5T035 196 aaKnown RBP3.16□□□□□ -1.9
NIPBL-207ENST00000513819 C1orf195Q5TG92 126 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 MRPL54Q6P161 138 aaKnown RBP3.16□□□□□ -1.9
NIPBL-207ENST00000513819 TIFABQ6ZNK6 161 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 DNM1P46Q6ZS02 220 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 PPP1R27Q86WC6 154 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 TGIF2LYQ8IUE0 185 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 C1orf174Q8IYL3 243 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 CEND1Q8N111 149 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 SUMF2Q8NBJ7 301 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 OR52R1Q8NGF1 315 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 OR2K2Q8NGT1 345 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 OR6K6Q8NGW6 343 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 OR4A5Q8NH83 315 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 CLDN23Q96B33 292 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 NUS1Q96E22 293 aa3.16□□□□□ -1.9
NIPBL-207ENST00000513819 SEC22AQ96IW7 307 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms