RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 TMEM101Q96IK0 257 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 IP6K3Q96PC2 410 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 SDF2Q99470 211 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 GPER1Q99527 375 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 VAMP8Q9BV40 100 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 RNF126Q9BV68 326 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 SAMD10Q9BYL1 202 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 WDR61Q9GZS3 305 aaKnown RBP3.19□□□□□ -1.9
NIPBL-207ENST00000513819 COA1Q9GZY4 146 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 BANF2Q9H503 90 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 NPVFQ9HCQ7 196 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 TNFRSF19Q9NS68 423 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 ANXA10Q9UJ72 324 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 CES1P1Q9UKY3 287 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 CYSLTR1Q9Y271 337 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 TP53TG1Q9Y2A0 90 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 ZNF443Q9Y2A4 671 aaPredicted RBP3.19□□□□□ -1.9
NIPBL-207ENST00000513819 YARS2Q9Y2Z4 477 aaKnown RBP3.19□□□□□ -1.9
NIPBL-207ENST00000513819 RPL36Q9Y3U8 105 aaKnown RBP3.19□□□□□ -1.9
NIPBL-207ENST00000513819 SMAD5-AS1Q9Y6J3 95 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 DIP2BQ9P265 1576 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 PHLPP1O60346 1717 aa3.19□□□□□ -1.9
NIPBL-207ENST00000513819 TANC1Q9C0D5 1861 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 LTN1O94822 1766 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 MYOM1P52179 1685 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 ADAMTSL3P82987 1691 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 IGLV3-10A0A075B6K4 115 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 A0A087X0T9 212 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 A0A1B0GW64 132 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 A0A1B0GWB2 263 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 ZNF705FA8MVS1 300 aaPredicted RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 F5H5P2 479 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 H0YJW9 148 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 H7C1C5 153 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 K7EP34 96 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 PIRO00625 290 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 NME4O00746 187 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 CDC42EP2O14613 210 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 SYNGR1O43759 233 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 CD5LO43866 347 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 SOX14O95416 240 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 ZNF682O95780 498 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 APOA2P02652 100 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 PFN1P07737 140 aaKnown RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 CXCL1P09341 107 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 P0C879 139 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 ZNF705DP0CH99 300 aaPredicted RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 ZNF705BP0CI00 300 aaPredicted RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 CDK2P24941 298 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 BLVRBP30043 206 aaPredicted RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 TSPOP30536 169 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 PYCR1P32322 319 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 NSG1P42857 185 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 KIR2DS2P43631 304 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 LHX2P50458 406 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 GZMMP51124 257 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 RND2P52198 227 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 DIO3P55073 304 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 PFN3P60673 137 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 UBE2NP61088 152 aaKnown RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 HSPE1P61604 102 aaKnown RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 IGLV3-21P80748 117 aaPredicted RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 MEF2CQ06413 473 aaPredicted RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 FMODQ06828 376 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 KLRB1Q12918 225 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 ENDOGQ14249 297 aaKnown RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 KIAA0040Q15053 153 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 PRR30Q53SZ7 412 aaPredicted RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 AADACL3Q5VUY0 350 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 TEX36Q5VZQ5 186 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 SFXN4Q6P4A7 337 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 C12orf54Q6X4T0 127 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 TMEM91Q6ZNR0 172 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 Q6ZVH6 145 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 C17orf82Q86X59 251 aaPredicted RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 RNF175Q8N4F7 328 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 LINC00471Q8N535 108 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 GATD1Q8NB37 220 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 OR8G5Q8NG78 346 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 OR51A2Q8NGJ7 313 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 OR51T1Q8NGJ9 327 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 OR1L8Q8NGR8 309 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 SLC25A40Q8TBP6 338 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 THEM6Q8WUY1 208 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 SLAMF6Q96DU3 332 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 DERL3Q96Q80 235 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 SPIN2AQ99865 258 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 RASL11BQ9BPW5 248 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 SPIN2BQ9BPZ2 258 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 MRPL45Q9BRJ2 306 aaKnown RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 NIPSNAP3BQ9BS92 247 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 DPY30Q9C005 99 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 ZNF702PQ9H963 129 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 HES4Q9HCC6 221 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 PRTFDC1Q9NRG1 225 aa3.18□□□□□ -1.9
NIPBL-207ENST00000513819 TXNL4BQ9NX01 149 aaKnown RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 MARCOQ9UEW3 520 aaPredicted RBP3.18□□□□□ -1.9
NIPBL-207ENST00000513819 NUP153P49790 1475 aaKnown RBP3.17□□□□□ -1.9
NIPBL-207ENST00000513819 PLIN4Q96Q06 1357 aa3.17□□□□□ -1.9
NIPBL-207ENST00000513819 TRBV24-1A0A075B6N3 115 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms