RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 A0A1W2PPR1 153 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 SRRM4A7MD48 611 aaKnown RBP17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 MYOD1P15172 320 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 M6PRP20645 277 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 PPT1P50897 306 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 GNB2P62879 340 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 PEA15Q15121 130 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 ABHD12Q8N2K0 398 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 OR9G1Q8NH87 305 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 SFT2D1Q8WV19 159 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 RPRMQ9NS64 109 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 H0YJW9 148 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 LY86O95711 162 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 ELLP55199 621 aaPredicted RBP17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 DLX1P56177 255 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 PBDC1Q9BVG4 233 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 TMEM133Q9H2Q1 129 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 FGF7P21781 194 aa17.71■□□□□ 0.43
CNEP1R1-202ENST00000427478 OR8B3Q8NGG8 313 aa17.71■□□□□ 0.43
CNEP1R1-202ENST00000427478 TMEM186Q96B77 213 aa17.71■□□□□ 0.43
CNEP1R1-202ENST00000427478 OR8B2Q96RD0 313 aa17.71■□□□□ 0.43
CNEP1R1-202ENST00000427478 RRHO14718 337 aa17.71■□□□□ 0.42
CNEP1R1-202ENST00000427478 RPP30P78346 268 aaKnown RBP17.71■□□□□ 0.42
CNEP1R1-202ENST00000427478 SERF2P84101 59 aa17.71■□□□□ 0.42
CNEP1R1-202ENST00000427478 OR5AN1Q8NGI8 311 aa17.71■□□□□ 0.42
CNEP1R1-202ENST00000427478 OR51B2Q9Y5P1 312 aa17.71■□□□□ 0.42
CNEP1R1-202ENST00000427478 HSPE1P61604 102 aaKnown RBP17.7■□□□□ 0.42
CNEP1R1-202ENST00000427478 PRB3Q04118 309 aaPredicted RBP17.7■□□□□ 0.42
CNEP1R1-202ENST00000427478 VWC2Q2TAL6 325 aa17.7■□□□□ 0.42
CNEP1R1-202ENST00000427478 FAM71F2Q6NXP2 309 aa17.7■□□□□ 0.42
CNEP1R1-202ENST00000427478 NEU4Q8WWR8 484 aaPredicted RBP17.7■□□□□ 0.42
CNEP1R1-202ENST00000427478 ST6GALNAC6Q969X2 333 aa17.7■□□□□ 0.42
CNEP1R1-202ENST00000427478 HARBI1Q96MB7 349 aa17.7■□□□□ 0.42
CNEP1R1-202ENST00000427478 NABP2Q9BQ15 211 aa17.7■□□□□ 0.42
CNEP1R1-202ENST00000427478 TIMM9Q9Y5J7 89 aa17.7■□□□□ 0.42
CNEP1R1-202ENST00000427478 DCHS2Q6V1P9 2916 aa17.7■□□□□ 0.42
CNEP1R1-202ENST00000427478 BTBD17A6NE02 478 aa17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 C19orf84I3L1E1 186 aa17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 UPK2O00526 184 aa17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 NUPL2O15504 423 aaKnown RBP17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 SAA1P0DJI8 122 aaPredicted RBP17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 DTX2Q86UW9 622 aa17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 NEIL1Q96FI4 390 aaPredicted RBP17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 TIMD4Q96H15 378 aa17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 HINT2Q9BX68 163 aa17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 MIOXQ9UGB7 285 aa17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 PRNDQ9UKY0 176 aa17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 TPRP12270 2363 aaKnown RBP17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 IL6RP08887 468 aaPredicted RBP17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 TMEM41BQ5BJD5 291 aa17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 WDR25Q64LD2 544 aaPredicted RBP17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 ETV3LQ6ZN32 361 aa17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 OSR1Q8TAX0 266 aaPredicted RBP17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 RAB1CQ92928 201 aa17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 RARRES2Q99969 163 aa17.69■□□□□ 0.42
CNEP1R1-202ENST00000427478 PPIAL4CA0A0B4J2A2 164 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 SCAF4O95104 1147 aaKnown RBP17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 PPIAL4GP0DN37 164 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 AGAP20933 346 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 ZNF726P1Q15940 193 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 SP5Q6BEB4 398 aaPredicted RBP17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 TGIF2LXQ8IUE1 241 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 TMEM170AQ8WVE7 144 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 ENY2Q9NPA8 101 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 HBE1P02100 147 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 OPN1MWP04001 364 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 OPN1MW2P0DN77 364 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 OPN1MW3P0DN78 364 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 ZNF137PP52743 207 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 RAB2AP61019 212 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 SSX7Q7RTT5 188 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 FLYWCH2Q96CP2 140 aaKnown RBP17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 UBTD1Q9HAC8 227 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 KIAA1456Q9P272 454 aa17.68■□□□□ 0.42
CNEP1R1-202ENST00000427478 RBFOX3A6NFN3 312 aa17.67■□□□□ 0.42
CNEP1R1-202ENST00000427478 TMEM177Q53S58 311 aa17.67■□□□□ 0.42
CNEP1R1-202ENST00000427478 ACSM6Q6P461 480 aa17.67■□□□□ 0.42
CNEP1R1-202ENST00000427478 CENPVQ7Z7K6 275 aaPredicted RBP17.67■□□□□ 0.42
CNEP1R1-202ENST00000427478 RCC1LQ96I51 464 aaKnown RBP17.67■□□□□ 0.42
CNEP1R1-202ENST00000427478 AIFM2Q9BRQ8 373 aa17.67■□□□□ 0.42
CNEP1R1-202ENST00000427478 NPCDR1Q9BY65 106 aa17.67■□□□□ 0.42
CNEP1R1-202ENST00000427478 BET1LQ9NYM9 111 aa17.67■□□□□ 0.42
CNEP1R1-202ENST00000427478 IGHV2-26A0A0B4J1V2 119 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 A0A1B0GW64 132 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 A0A1W2PPH5 198 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 FAM74A7A6NL05 159 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 SNAPINO95295 136 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 CDKN1AP38936 164 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 HAGHQ16775 308 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 FAM74A3Q4VXF1 159 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 LCN15Q6UWW0 184 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 PDPNQ86YL7 162 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 LHX4Q969G2 390 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 SPTBN1Q01082 2364 aaKnown RBP17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 MALRD1Q5VYJ5 2156 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 SMCO3A2RU48 225 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 DNASE2O00115 360 aaPredicted RBP17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 KBTBD11O94819 623 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 IL3RAP26951 378 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 CD1BP29016 333 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms