RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 RHOVQ96L33 236 aa17.8■□□□□ 0.44
CNEP1R1-202ENST00000427478 CACNA1AO00555 2505 aa17.79■□□□□ 0.44
CNEP1R1-202ENST00000427478 PPIHO43447 177 aaKnown RBP17.79■□□□□ 0.44
CNEP1R1-202ENST00000427478 LY6HO94772 140 aa17.79■□□□□ 0.44
CNEP1R1-202ENST00000427478 IGHV2-70P01814 119 aa17.79■□□□□ 0.44
CNEP1R1-202ENST00000427478 DLX6P56179 175 aa17.79■□□□□ 0.44
CNEP1R1-202ENST00000427478 CBLN4Q9NTU7 201 aa17.79■□□□□ 0.44
CNEP1R1-202ENST00000427478 TMEM8BA6NDV4 472 aa17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 PMS2P5A8MQ11 134 aa17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 CD5P06127 495 aa17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 SPCS3P61009 180 aa17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 OR4A47Q6IF82 309 aa17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 RAB39BQ96DA2 213 aa17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 WDR61Q9GZS3 305 aaKnown RBP17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 RAB1BQ9H0U4 201 aa17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 SLC35D1Q9NTN3 355 aa17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 GPR37O15354 613 aa17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 DVL1P1P54792 670 aaPredicted RBP17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 TAGLNQ01995 201 aaKnown RBP17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 C4orf17Q53FE4 359 aa17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 COMMD1Q8N668 190 aa17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 MRPL20Q9BYC9 149 aaKnown RBP17.78■□□□□ 0.44
CNEP1R1-202ENST00000427478 C9JQL5 133 aa17.77■□□□□ 0.44
CNEP1R1-202ENST00000427478 SOD3P08294 240 aa17.77■□□□□ 0.44
CNEP1R1-202ENST00000427478 BTN1A1Q13410 526 aa17.77■□□□□ 0.44
CNEP1R1-202ENST00000427478 RTL8BQ17RB0 113 aa17.77■□□□□ 0.44
CNEP1R1-202ENST00000427478 OR10P1Q8NGE3 313 aa17.77■□□□□ 0.44
CNEP1R1-202ENST00000427478 HIVEP3Q5T1R4 2406 aa17.77■□□□□ 0.44
CNEP1R1-202ENST00000427478 IGKV1-16P04430 117 aa17.77■□□□□ 0.43
CNEP1R1-202ENST00000427478 SFTA3P0C7M3 94 aa17.77■□□□□ 0.43
CNEP1R1-202ENST00000427478 GUK1Q16774 197 aa17.77■□□□□ 0.43
CNEP1R1-202ENST00000427478 OR13D1Q8NGV5 346 aa17.77■□□□□ 0.43
CNEP1R1-202ENST00000427478 OR10X1Q8NGY0 326 aa17.77■□□□□ 0.43
CNEP1R1-202ENST00000427478 OR52E5Q8NH55 327 aa17.77■□□□□ 0.43
CNEP1R1-202ENST00000427478 SUN5Q8TC36 379 aa17.77■□□□□ 0.43
CNEP1R1-202ENST00000427478 ITLN2Q8WWU7 325 aaPredicted RBP17.77■□□□□ 0.43
CNEP1R1-202ENST00000427478 RALYQ9UKM9 306 aaKnown RBP17.77■□□□□ 0.43
CNEP1R1-202ENST00000427478 C15orf61A6NNL5 157 aa17.76■□□□□ 0.43
CNEP1R1-202ENST00000427478 C15orf62A8K5M9 175 aa17.76■□□□□ 0.43
CNEP1R1-202ENST00000427478 J3QR06 171 aa17.76■□□□□ 0.43
CNEP1R1-202ENST00000427478 F12P00748 615 aaPredicted RBP17.76■□□□□ 0.43
CNEP1R1-202ENST00000427478 HRASP01112 189 aa17.76■□□□□ 0.43
CNEP1R1-202ENST00000427478 REG1BP48304 166 aa17.76■□□□□ 0.43
CNEP1R1-202ENST00000427478 GUCA2BQ16661 112 aa17.76■□□□□ 0.43
CNEP1R1-202ENST00000427478 C11orf71Q6IPW1 123 aa17.76■□□□□ 0.43
CNEP1R1-202ENST00000427478 CLCC1Q96S66 551 aa17.76■□□□□ 0.43
CNEP1R1-202ENST00000427478 LRBAP50851 2863 aa17.76■□□□□ 0.43
CNEP1R1-202ENST00000427478 ABCA4P78363 2273 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 TRBV23-1A0A0A0MS06 115 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 HNF4GQ14541 408 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 C10orf91Q5T1B1 145 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 TAF15Q92804 592 aaKnown RBP eCLIP17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 PINX1Q96BK5 328 aaKnown RBP17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 PSMG3Q9BT73 122 aaPredicted RBP17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 TMEM147Q9BVK8 224 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 PARD6GQ9BYG4 376 aaPredicted RBP17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 H2AFB1P0C5Y9 115 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 OR8U8P0C7N1 319 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 IGHV1-8P0DP01 117 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 SPSB3Q6PJ21 355 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 ZNF841Q6ZN19 808 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 ZNF429Q86V71 674 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 SCRT1Q9BWW7 348 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 SEC11CQ9BY50 192 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 EIF5A2Q9GZV4 153 aaKnown RBP17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 HEYLQ9NQ87 328 aaPredicted RBP17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 TCF19Q9Y242 345 aa17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 CARHSP1Q9Y2V2 147 aaKnown RBP17.75■□□□□ 0.43
CNEP1R1-202ENST00000427478 FAM157AC9JC47 383 aa17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 ARG1P05089 322 aa17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 POU2AF1Q16633 256 aa17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 ATP6V1FQ16864 119 aa17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 PDLIM3Q53GG5 364 aaPredicted RBP17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 DHRS7BQ6IAN0 325 aaPredicted RBP17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 LFNGQ8NES3 379 aa17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 VSIRQ9H7M9 311 aa17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 FSTL3O95633 263 aa17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 VDAC2P45880 294 aaPredicted RBP17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 HOXA1P49639 335 aaPredicted RBP17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 CCL20P78556 96 aa17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 DIAPH2-AS1Q14236 149 aa17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 DPPA3Q6W0C5 159 aa17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 SVBPQ8N300 66 aa17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 C11orf42Q8N5U0 333 aa17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 NKX6-2Q9C056 277 aaPredicted RBP17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 HIPK2Q9H2X6 1198 aa17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 FOXA2Q9Y261 457 aaPredicted RBP17.74■□□□□ 0.43
CNEP1R1-202ENST00000427478 HRNRQ86YZ3 2850 aaPredicted RBP17.73■□□□□ 0.43
CNEP1R1-202ENST00000427478 H7C2Y5 167 aa17.73■□□□□ 0.43
CNEP1R1-202ENST00000427478 IFNA10P01566 189 aa17.73■□□□□ 0.43
CNEP1R1-202ENST00000427478 APOA2P02652 100 aa17.73■□□□□ 0.43
CNEP1R1-202ENST00000427478 TLE4Q04727 773 aa17.73■□□□□ 0.43
CNEP1R1-202ENST00000427478 PUSL1Q8N0Z8 303 aaKnown RBP17.73■□□□□ 0.43
CNEP1R1-202ENST00000427478 LINC00311Q8N616 119 aa17.73■□□□□ 0.43
CNEP1R1-202ENST00000427478 C8orf31Q8N9H6 132 aa17.73■□□□□ 0.43
CNEP1R1-202ENST00000427478 ZNF596Q8TC21 504 aa17.73■□□□□ 0.43
CNEP1R1-202ENST00000427478 TMEM14BQ9NUH8 114 aa17.73■□□□□ 0.43
CNEP1R1-202ENST00000427478 PKD1L2Q7Z442 2459 aa17.73■□□□□ 0.43
CNEP1R1-202ENST00000427478 A0A087X0M5 115 aa17.72■□□□□ 0.43
CNEP1R1-202ENST00000427478 A0A1B0GX30 115 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms