RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 FAM214BQ7L5A3 538 aa16.91■□□□□ 0.3
CLN5-201ENST00000377453 ABHD12Q8N2K0 398 aa16.91■□□□□ 0.3
CLN5-201ENST00000377453 CXXC4Q9H2H0 198 aa16.91■□□□□ 0.3
CLN5-201ENST00000377453 CLCF1Q9UBD9 225 aa16.91■□□□□ 0.3
CLN5-201ENST00000377453 HEATR1Q9H583 2144 aaKnown RBP16.91■□□□□ 0.3
CLN5-201ENST00000377453 TMEM210A6NLX4 147 aa16.91■□□□□ 0.3
CLN5-201ENST00000377453 IFNA10P01566 189 aa16.91■□□□□ 0.3
CLN5-201ENST00000377453 ATP6V1FQ16864 119 aa16.91■□□□□ 0.3
CLN5-201ENST00000377453 ZBTB34Q8NCN2 500 aa16.91■□□□□ 0.3
CLN5-201ENST00000377453 GNG12Q9UBI6 72 aa16.91■□□□□ 0.3
CLN5-201ENST00000377453 CNOT1A5YKK6 2376 aaKnown RBP16.91■□□□□ 0.3
CLN5-201ENST00000377453 A0A087X0M5 115 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 A0A1B0GX30 115 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 MYOD1P15172 320 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 DDTP30046 118 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 KIR2DL2P43627 348 aaPredicted RBP16.9■□□□□ 0.3
CLN5-201ENST00000377453 MIC13Q5XKP0 118 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 ZNF600Q6ZNG1 722 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 RYDENQ9NUL5 291 aaKnown RBP16.9■□□□□ 0.3
CLN5-201ENST00000377453 C15orf65H3BRN8 121 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 M0R1X1 148 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 CD1BP29016 333 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 ZNF134P52741 427 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 NUBP1P53384 320 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 PRAMEF5Q5TYX0 476 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 Q6ZT83 130 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 OR2Z1Q8NG97 314 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 OR2T10Q8NGZ9 312 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 SSMEM1Q8WWF3 244 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 TAAR6Q96RI8 345 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 MANBALQ9NQG1 85 aa16.9■□□□□ 0.3
CLN5-201ENST00000377453 HCFC1P51610 2035 aa16.89■□□□□ 0.29
CLN5-201ENST00000377453 AQP7O14520 342 aa16.89■□□□□ 0.29
CLN5-201ENST00000377453 SLC31A2O15432 143 aa16.89■□□□□ 0.29
CLN5-201ENST00000377453 GPR12P47775 334 aa16.89■□□□□ 0.29
CLN5-201ENST00000377453 TCF23Q7RTU1 214 aa16.89■□□□□ 0.29
CLN5-201ENST00000377453 ZNRF1Q8ND25 227 aa16.89■□□□□ 0.29
CLN5-201ENST00000377453 MRPL37Q9BZE1 423 aaKnown RBP16.89■□□□□ 0.29
CLN5-201ENST00000377453 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.89■□□□□ 0.29
CLN5-201ENST00000377453 SNRPCP09234 159 aaKnown RBP16.89■□□□□ 0.29
CLN5-201ENST00000377453 DUTP33316 252 aaKnown RBP16.89■□□□□ 0.29
CLN5-201ENST00000377453 TNFSF10P50591 281 aa16.89■□□□□ 0.29
CLN5-201ENST00000377453 DUSP13Q9UII6 198 aa16.89■□□□□ 0.29
CLN5-201ENST00000377453 PCNX2A6NKB5 2137 aa16.89■□□□□ 0.29
CLN5-201ENST00000377453 MBP02144 154 aa16.88■□□□□ 0.29
CLN5-201ENST00000377453 ZNF883P0CG24 379 aa16.88■□□□□ 0.29
CLN5-201ENST00000377453 HOXC12P31275 282 aa16.88■□□□□ 0.29
CLN5-201ENST00000377453 INO80CQ6PI98 192 aaPredicted RBP16.88■□□□□ 0.29
CLN5-201ENST00000377453 OPN3Q9H1Y3 402 aaPredicted RBP16.88■□□□□ 0.29
CLN5-201ENST00000377453 RBFOX2O43251 390 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLN5-201ENST00000377453 PRDX2P32119 198 aa16.88■□□□□ 0.29
CLN5-201ENST00000377453 PMS2P11Q13670 270 aa16.88■□□□□ 0.29
CLN5-201ENST00000377453 VWC2Q2TAL6 325 aa16.88■□□□□ 0.29
CLN5-201ENST00000377453 LINC01551Q86U37 167 aa16.88■□□□□ 0.29
CLN5-201ENST00000377453 FDCSPQ8NFU4 85 aa16.88■□□□□ 0.29
CLN5-201ENST00000377453 TMEM170AQ8WVE7 144 aa16.88■□□□□ 0.29
CLN5-201ENST00000377453 MS4A5Q9H3V2 200 aa16.88■□□□□ 0.29
CLN5-201ENST00000377453 INTS1Q8N201 2190 aaKnown RBP16.88■□□□□ 0.29
CLN5-201ENST00000377453 DCHS1Q96JQ0 3298 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 TRBV20OR9-2A0A075B6H5 130 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 ARL14EPLP0DKL9 152 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 IL3RAP26951 378 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 THBS3P49746 956 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 PKIAP61925 76 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 ACOT6Q3I5F7 207 aaPredicted RBP16.87■□□□□ 0.29
CLN5-201ENST00000377453 SPATA31B1PQ5VZV4 182 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 HEYLQ9NQ87 328 aaPredicted RBP16.87■□□□□ 0.29
CLN5-201ENST00000377453 WDR83OSQ9Y284 106 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 TET2Q6N021 2002 aaPredicted RBP16.87■□□□□ 0.29
CLN5-201ENST00000377453 PTPRBP23467 1997 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 IGKV1D-17A0A075B6S4 117 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 TGOLN2O43493 480 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 IGKV3-15P01624 115 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 DUX4L9Q6RFH8 374 aaPredicted RBP16.87■□□□□ 0.29
CLN5-201ENST00000377453 ZNF664Q8N3J9 261 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 TMEM178AQ8NBL3 297 aa16.87■□□□□ 0.29
CLN5-201ENST00000377453 CIB3Q96Q77 187 aaPredicted RBP16.87■□□□□ 0.29
CLN5-201ENST00000377453 SPINT2O43291 252 aa16.86■□□□□ 0.29
CLN5-201ENST00000377453 JOSD1Q15040 202 aaPredicted RBP16.86■□□□□ 0.29
CLN5-201ENST00000377453 SMIM21Q3B7S5 101 aa16.86■□□□□ 0.29
CLN5-201ENST00000377453 DMRTC2Q8IXT2 367 aaPredicted RBP16.86■□□□□ 0.29
CLN5-201ENST00000377453 FAM122AQ96E09 287 aa16.86■□□□□ 0.29
CLN5-201ENST00000377453 MGST2Q99735 147 aa16.86■□□□□ 0.29
CLN5-201ENST00000377453 SCO2A0A1W2PP80 73 aa16.86■□□□□ 0.29
CLN5-201ENST00000377453 A0A1W2PPV4 95 aa16.86■□□□□ 0.29
CLN5-201ENST00000377453 J3QW42 95 aa16.86■□□□□ 0.29
CLN5-201ENST00000377453 ACTL10Q5JWF8 245 aa16.86■□□□□ 0.29
CLN5-201ENST00000377453 VHLLQ6RSH7 139 aa16.86■□□□□ 0.29
CLN5-201ENST00000377453 TREML4Q6UXN2 200 aa16.86■□□□□ 0.29
CLN5-201ENST00000377453 HSD17B10Q99714 261 aaKnown RBP16.86■□□□□ 0.29
CLN5-201ENST00000377453 ZNF320A2RRD8 509 aa16.85■□□□□ 0.29
CLN5-201ENST00000377453 C17orf112F2Z3M2 114 aa16.85■□□□□ 0.29
CLN5-201ENST00000377453 NUPR1O60356 82 aa16.85■□□□□ 0.29
CLN5-201ENST00000377453 IGHV1-18A0A0C4DH31 117 aa16.85■□□□□ 0.29
CLN5-201ENST00000377453 WT1P19544 449 aaPredicted RBP16.85■□□□□ 0.29
CLN5-201ENST00000377453 TMEM256Q8N2U0 113 aa16.85■□□□□ 0.29
CLN5-201ENST00000377453 OR4A16Q8NH70 328 aa16.85■□□□□ 0.29
CLN5-201ENST00000377453 IGHV2OR16-5A0A0B4J2B6 119 aa16.84■□□□□ 0.29
CLN5-201ENST00000377453 TSTD3H0UI37 97 aa16.84■□□□□ 0.29
CLN5-201ENST00000377453 GGCTO75223 188 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms