RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 GJE1A6NN92 205 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 KIR3DP1A8MWS1 328 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 F6UZH7 168 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 RBFOX2O43251 390 aaKnown RBP eCLIP9.97□□□□□ -0.813e-6■■□□□ 13
RBM39-202ENST00000338163 ZG16O60844 167 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 SSR4P51571 173 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 EDDM3BP56851 147 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 SOX8P57073 446 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 KRTDAPP60985 99 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 TMEM14EPQ6UXP3 125 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 OR10D3Q8NH80 312 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 SFRP2Q96HF1 295 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 C1QTNF5Q9BXJ0 243 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 RIMS4Q9H426 269 aaPredicted RBP9.97□□□□□ -0.81
RBM39-202ENST00000338163 DLL3Q9NYJ7 618 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 ZNF716A6NP11 495 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 DEGS1O15121 323 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 CRISP2P16562 243 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 ZNF90Q03938 601 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 TRA2AQ13595 282 aaKnown RBP eCLIP9.97□□□□□ -0.812e-11■■■□□ 18.7
RBM39-202ENST00000338163 SRSF7Q16629 238 aaKnown RBP eCLIP9.97□□□□□ -0.815e-7■■■□□ 16.7
RBM39-202ENST00000338163 DRAM1Q8N682 238 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 SF3B5Q9BWJ5 86 aaKnown RBP9.97□□□□□ -0.81
RBM39-202ENST00000338163 STRADBQ9C0K7 418 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 PROK2Q9HC23 129 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 ELOVL5Q9NYP7 299 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 LOXL2Q9Y4K0 774 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 TIMM9Q9Y5J7 89 aa9.97□□□□□ -0.81
RBM39-202ENST00000338163 A0A1W2PPV4 95 aa9.96□□□□□ -0.81
RBM39-202ENST00000338163 RHBDL1O75783 438 aa9.96□□□□□ -0.81
RBM39-202ENST00000338163 TNFSF13O75888 250 aa9.96□□□□□ -0.81
RBM39-202ENST00000338163 TGFBR3Q03167 851 aa9.96□□□□□ -0.81
RBM39-202ENST00000338163 WIPI1Q5MNZ9 446 aaPredicted RBP9.96□□□□□ -0.81
RBM39-202ENST00000338163 TPTE2P1Q5T6R2 138 aa9.96□□□□□ -0.81
RBM39-202ENST00000338163 FAM58AQ8N1B3 248 aa9.96□□□□□ -0.81
RBM39-202ENST00000338163 C11orf42Q8N5U0 333 aa9.96□□□□□ -0.81
RBM39-202ENST00000338163 OR5AU1Q8NGC0 362 aa9.96□□□□□ -0.81
RBM39-202ENST00000338163 OR5A2Q8NGI9 324 aa9.96□□□□□ -0.81
RBM39-202ENST00000338163 TUBG2Q9NRH3 451 aa9.96□□□□□ -0.81
RBM39-202ENST00000338163 F2Z2F3 143 aa9.96□□□□□ -0.82
RBM39-202ENST00000338163 SLC17A3O00476 420 aa9.96□□□□□ -0.82
RBM39-202ENST00000338163 SPINK4O60575 86 aa9.96□□□□□ -0.82
RBM39-202ENST00000338163 CBR3O75828 277 aa9.96□□□□□ -0.82
RBM39-202ENST00000338163 CD82P27701 267 aa9.96□□□□□ -0.82
RBM39-202ENST00000338163 SRYQ05066 204 aa9.96□□□□□ -0.82
RBM39-202ENST00000338163 Q8NFD4 153 aa9.96□□□□□ -0.82
RBM39-202ENST00000338163 SPSB4Q96A44 273 aa9.96□□□□□ -0.82
RBM39-202ENST00000338163 REPIN1Q9BWE0 567 aaKnown RBP9.96□□□□□ -0.82
RBM39-202ENST00000338163 MRPS18CQ9Y3D5 142 aaKnown RBP9.96□□□□□ -0.82
RBM39-202ENST00000338163 TRAV34A0A0B4J273 112 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 MLNRO43193 412 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 SYNGR4O95473 234 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 MRPS11P82912 194 aaKnown RBP9.95□□□□□ -0.82
RBM39-202ENST00000338163 ARF1P84077 181 aaKnown RBP9.95□□□□□ -0.82
RBM39-202ENST00000338163 PCOLCEQ15113 449 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 MSMO1Q15800 293 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 TMEM144Q7Z5S9 345 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 BTF3L4Q96K17 158 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 PRDM14Q9GZV8 571 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 DNAJC4Q9NNZ3 241 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 TRBV20OR9-2A0A075B6H5 130 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 LRP5LA4QPB2 252 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 TM4SF5O14894 197 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 PDE6DO43924 150 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 UMODP07911 640 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 RFPL3SP0C7P2 107 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 LINC00614P0C842 121 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 GAGE1Q13065 139 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 MMDQ15546 238 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 KRTAP27-1Q3LI81 207 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 SPATA46Q5T0L3 261 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 FAM53AQ6NSI3 398 aaPredicted RBP9.95□□□□□ -0.82
RBM39-202ENST00000338163 CIB3Q96Q77 187 aaPredicted RBP9.95□□□□□ -0.82
RBM39-202ENST00000338163 MRPL18Q9H0U6 180 aaKnown RBP9.95□□□□□ -0.82
RBM39-202ENST00000338163 FOXJ2Q9P0K8 574 aa9.95□□□□□ -0.82
RBM39-202ENST00000338163 ODAMA1E959 279 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 FCN1O00602 326 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 MRPL33O75394 65 aaKnown RBP9.94□□□□□ -0.82
RBM39-202ENST00000338163 WNT2P09544 360 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 CA6P23280 308 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 IER3P46695 156 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 RAB7AP51149 207 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 UBE2NP61088 152 aaKnown RBP9.94□□□□□ -0.82
RBM39-202ENST00000338163 RPS19BP1Q86WX3 136 aaKnown RBP9.94□□□□□ -0.82
RBM39-202ENST00000338163 C20orf144Q9BQM9 153 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 PARD6GQ9BYG4 376 aaPredicted RBP9.94□□□□□ -0.82
RBM39-202ENST00000338163 PRRG4Q9BZD6 226 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 OR2D2Q9H210 308 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 C17orf112F2Z3M2 114 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 S1PR2O95136 353 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 CHRNB4P30926 498 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 GNG10P50151 68 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 FOXG1P55316 489 aaPredicted RBP9.94□□□□□ -0.82
RBM39-202ENST00000338163 IL11RAQ14626 422 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 COL5A1-AS1Q5SY13 56 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 TEX43Q6ZNM6 134 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 GGNQ86UU5 652 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 SAXO1Q8IYX7 474 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 TP53TG3Q9ULZ0 132 aa9.94□□□□□ -0.82
RBM39-202ENST00000338163 SCO2A0A1W2PP80 73 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms