RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 PTX4Q96A99 478 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 PLEKHB2Q96CS7 222 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 DNAJC19Q96DA6 116 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZMYND19Q96E35 227 aaPredicted RBP1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 YPEL4Q96NS1 127 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR2A7Q96R45 310 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 TRIB3Q96RU7 358 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 ATP5SQ99766 215 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 RASL11BQ9BPW5 248 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 ANAPC13Q9BS18 74 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 MRPL32Q9BYC8 188 aaKnown RBP1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 SELENOIQ9C0D9 397 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 C20orf27Q9GZN8 174 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 PBOV1Q9GZY1 135 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 NAA50Q9GZZ1 169 aaKnown RBP1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLC25A31Q9H0C2 315 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 LPAR5Q9H1C0 372 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 PARLQ9H300 379 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 DUSP21Q9H596 190 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 GNB4Q9HAV0 340 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 CDH20Q9HBT6 801 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 POPDC3Q9HBV1 291 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 SH2D2AQ9NP31 389 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 CISHQ9NSE2 258 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 ACER3Q9NUN7 267 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 IDI2-AS1Q9NZ38 188 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 EHFQ9NZC4 300 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 IL36GQ9NZH8 169 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 KCNIP1Q9NZI2 227 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF319Q9P2F9 582 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 LAMTOR3Q9UHA4 124 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 SHPKQ9UHJ6 478 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 ABT1Q9ULW3 272 aaKnown RBP1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 NOP16Q9Y3C1 178 aaKnown RBP1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 ORC6Q9Y5N6 252 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 SOX21Q9Y651 276 aaPredicted RBP1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 V9GYH0 126 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 LRP5O75197 1615 aa1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 MYH9P35579 1960 aaKnown RBP1.58□□□□□ -2.16
HMGB3P17-201ENST00000504195 MRC1P22897 1456 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 LAMB1P07942 1786 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ANKRD36CQ5JPF3 1778 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 NEXMIFQ5QGS0 1516 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 GLI2P10070 1586 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 CEP170Q5SW79 1584 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SAMD9LQ8IVG5 1584 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TRAV5A0A0B4J249 113 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TRAV24A0A0B4J272 114 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 A0A0D9SFI3 127 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 A0A0G2JND7 137 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 A0A1B0GW64 132 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 DHRS12A0PJE2 317 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 DAPL1A0PJW8 107 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TSPAN11A1L157 253 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 NAP1L6A6NFF2 107 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 LRRC30A6NM36 301 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR4C45A6NMZ5 311 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 CD300LBA8K4G0 201 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SNRPGP15A8MWD9 76 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 MCRIP1C9JLW8 97 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 H7C1C5 153 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 K7EN84 100 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 K7ENP7 123 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF593O00488 134 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 MLNRO43193 412 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TRAF3IP2O43734 574 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLC37A4O43826 429 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 HIST1H2BKO60814 126 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 MPDU1O75352 247 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 EEDO75530 441 aaKnown RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 CDK2AP2O75956 126 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 STK17BO94768 372 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 YIF1AO95070 293 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR2H2O95918 312 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 CD8AP01732 235 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 IGHG2P01859 326 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TTRP02766 147 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 VTNP04004 478 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 P04436 131 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 HIST1H2BJP06899 126 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 GPX1P07203 203 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 CTSDP07339 412 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SOD3P08294 240 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 IL3P08700 152 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 CT62P0C5K7 136 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SEC11BP0C7V7 166 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 IGLC1P0CG04 106 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR12D1P0DN82 309 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 FABP4P15090 132 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SELEP16581 610 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ADCYAP1P18509 176 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 CSRP1P21291 193 aaKnown RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 HIST1H2BOP23527 126 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 BLVRBP30043 206 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 HIST1H2BBP33778 126 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SDC2P34741 201 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 DRD3P35462 400 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 GUCA1AP43080 201 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 P2RY1P47900 373 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 EMDP50402 254 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms