RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 ADORA1P30542 326 aa1.05□□□□□ -2.24
TRAPPC11-210ENST00000513600 CDK9P50750 372 aaKnown RBP1.05□□□□□ -2.24
TRAPPC11-210ENST00000513600 PSMD7P51665 324 aa1.05□□□□□ -2.24
TRAPPC11-210ENST00000513600 LINC00313P59037 77 aa1.05□□□□□ -2.24
TRAPPC11-210ENST00000513600 TAS2R30P59541 319 aa1.05□□□□□ -2.24
TRAPPC11-210ENST00000513600 PLCXD2Q0VAA5 305 aa1.05□□□□□ -2.24
TRAPPC11-210ENST00000513600 XKRXQ6PP77 449 aa1.05□□□□□ -2.24
TRAPPC11-210ENST00000513600 RPS4Y2Q8TD47 263 aa1.05□□□□□ -2.24
TRAPPC11-210ENST00000513600 CST9LQ9H4G1 147 aa1.05□□□□□ -2.24
TRAPPC11-210ENST00000513600 ASS1P00966 412 aaKnown RBP1.04□□□□□ -2.24
TRAPPC11-210ENST00000513600 GPX2P18283 190 aa1.04□□□□□ -2.24
TRAPPC11-210ENST00000513600 CCR7P32248 378 aa1.04□□□□□ -2.24
TRAPPC11-210ENST00000513600 AKR1C3P42330 323 aa1.04□□□□□ -2.24
TRAPPC11-210ENST00000513600 GNA12Q03113 381 aa1.04□□□□□ -2.24
TRAPPC11-210ENST00000513600 SLC36A2Q495M3 483 aa1.04□□□□□ -2.24
TRAPPC11-210ENST00000513600 OR10K2Q6IF99 312 aa1.04□□□□□ -2.24
TRAPPC11-210ENST00000513600 TNFAIP8L1Q8WVP5 186 aa1.04□□□□□ -2.24
TRAPPC11-210ENST00000513600 ACY3Q96HD9 319 aa1.04□□□□□ -2.24
TRAPPC11-210ENST00000513600 NKX6-2Q9C056 277 aaPredicted RBP1.04□□□□□ -2.24
TRAPPC11-210ENST00000513600 ENPP5Q9UJA9 477 aa1.04□□□□□ -2.24
TRAPPC11-210ENST00000513600 IGHV3-64A0A075B6Q5 118 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 MEIKINA0A087WXM9 373 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 IGKV2D-26A0A0A0MRZ7 120 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 F8W036 122 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 NDUFS8O00217 210 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 SULT1C2O00338 296 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 BHLHE40O14503 412 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 CST4P01036 141 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 IGLV3-27P01718 113 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 CD24P25063 80 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 CCR2P41597 374 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 DAPP51397 102 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 OR2D3Q8NGH3 330 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 CCDC12Q8WUD4 166 aaPredicted RBP1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 TAAR3PQ9P1P4 343 aa1.03□□□□□ -2.24
TRAPPC11-210ENST00000513600 SLX4Q8IY92 1834 aa1.03□□□□□ -2.25
TRAPPC11-210ENST00000513600 GSTZ1O43708 216 aaPredicted RBP1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 ARL6IP5O75915 188 aa1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 TNFAIP8O95379 198 aa1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 CRYBA1P05813 215 aa1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 CCDC172P0C7W6 258 aa1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 FBN2P35556 2912 aa1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 HSPA9P38646 679 aaKnown RBP1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 HOXC5Q00444 222 aa1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 CDK5R1Q15078 307 aa1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 SLC13A5Q86YT5 568 aaPredicted RBP1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 NATD1Q8N6N6 113 aa1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 OR51T1Q8NGJ9 327 aa1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 PPWD1Q96BP3 646 aaKnown RBP1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 TMEM56Q96MV1 263 aa1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 DOHHQ9BU89 302 aa1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 VCX3BQ9H321 246 aa1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 MS4A12Q9NXJ0 267 aa1.02□□□□□ -2.25
TRAPPC11-210ENST00000513600 LIMS3P0CW19 117 aa1.01□□□□□ -2.25
TRAPPC11-210ENST00000513600 LIMS4P0CW20 117 aa1.01□□□□□ -2.25
TRAPPC11-210ENST00000513600 AGTR1P30556 359 aa1.01□□□□□ -2.25
TRAPPC11-210ENST00000513600 CA7P43166 264 aa1.01□□□□□ -2.25
TRAPPC11-210ENST00000513600 FP248Q71RG6 208 aaPredicted RBP1.01□□□□□ -2.25
TRAPPC11-210ENST00000513600 EIF5A2Q9GZV4 153 aaKnown RBP1.01□□□□□ -2.25
TRAPPC11-210ENST00000513600 MRM2Q9UI43 246 aaKnown RBP1.01□□□□□ -2.25
TRAPPC11-210ENST00000513600 LIN7AO14910 233 aaPredicted RBP1□□□□□ -2.25
TRAPPC11-210ENST00000513600 SGCEO43556 437 aa1□□□□□ -2.25
TRAPPC11-210ENST00000513600 STC1P52823 247 aa1□□□□□ -2.25
TRAPPC11-210ENST00000513600 SURF2Q15527 256 aaPredicted RBP1□□□□□ -2.25
TRAPPC11-210ENST00000513600 TMEM249Q2WGJ8 235 aa1□□□□□ -2.25
TRAPPC11-210ENST00000513600 ATP5L2Q7Z4Y8 100 aa1□□□□□ -2.25
TRAPPC11-210ENST00000513600 KTN1-AS1Q86SY8 53 aa1□□□□□ -2.25
TRAPPC11-210ENST00000513600 RPS19BP1Q86WX3 136 aaKnown RBP1□□□□□ -2.25
TRAPPC11-210ENST00000513600 DAND5Q8N907 189 aa1□□□□□ -2.25
TRAPPC11-210ENST00000513600 FAM210AQ96ND0 272 aa1□□□□□ -2.25
TRAPPC11-210ENST00000513600 UGT2B28Q9BY64 529 aa1□□□□□ -2.25
TRAPPC11-210ENST00000513600 KLK5Q9Y337 293 aaPredicted RBP1□□□□□ -2.25
TRAPPC11-210ENST00000513600 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1□□□□□ -2.25
TRAPPC11-210ENST00000513600 GRIN2BQ13224 1484 aa0.99□□□□□ -2.25
TRAPPC11-210ENST00000513600 MRASO14807 208 aa0.99□□□□□ -2.25
TRAPPC11-210ENST00000513600 KLRC4O43908 158 aa0.99□□□□□ -2.25
TRAPPC11-210ENST00000513600 UGT2B11O75310 529 aa0.99□□□□□ -2.25
TRAPPC11-210ENST00000513600 HBZP02008 142 aa0.99□□□□□ -2.25
TRAPPC11-210ENST00000513600 CCL2P13500 99 aa0.99□□□□□ -2.25
TRAPPC11-210ENST00000513600 HERVK_113P63121 156 aa0.99□□□□□ -2.25
TRAPPC11-210ENST00000513600 CTAG1AP78358 180 aa0.99□□□□□ -2.25
TRAPPC11-210ENST00000513600 SCGB1D4Q6XE38 83 aa0.99□□□□□ -2.25
TRAPPC11-210ENST00000513600 CLDND2Q8NHS1 167 aa0.99□□□□□ -2.25
TRAPPC11-210ENST00000513600 SMCR5Q8TEV8 140 aa0.99□□□□□ -2.25
TRAPPC11-210ENST00000513600 RAB8AP61006 207 aa0.98□□□□□ -2.25
TRAPPC11-210ENST00000513600 SLC7A6Q92536 515 aa0.98□□□□□ -2.25
TRAPPC11-210ENST00000513600 CCDC124Q96CT7 223 aaKnown RBP0.98□□□□□ -2.25
TRAPPC11-210ENST00000513600 MSANTD3Q96H12 275 aa0.98□□□□□ -2.25
TRAPPC11-210ENST00000513600 DSCAML1Q8TD84 2053 aa0.98□□□□□ -2.25
TRAPPC11-210ENST00000513600 MRPS14O60783 128 aaKnown RBP0.97□□□□□ -2.25
TRAPPC11-210ENST00000513600 NDUFB2O95178 105 aa0.97□□□□□ -2.25
TRAPPC11-210ENST00000513600 NPYP01303 97 aa0.97□□□□□ -2.25
TRAPPC11-210ENST00000513600 OR10J1P30954 320 aa0.97□□□□□ -2.25
TRAPPC11-210ENST00000513600 LGALS9BQ3B8N2 356 aa0.97□□□□□ -2.25
TRAPPC11-210ENST00000513600 MESTQ5EB52 335 aa0.97□□□□□ -2.25
TRAPPC11-210ENST00000513600 ZNF705AQ6ZN79 300 aaPredicted RBP0.97□□□□□ -2.25
TRAPPC11-210ENST00000513600 SPATA12Q7Z6I5 190 aa0.97□□□□□ -2.25
TRAPPC11-210ENST00000513600 ODF3Q96PU9 254 aa0.97□□□□□ -2.25
TRAPPC11-210ENST00000513600 TMEM208Q9BTX3 173 aa0.97□□□□□ -2.25
TRAPPC11-210ENST00000513600 ADAT1Q9BUB4 502 aaKnown RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms