RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 TBX15Q96SF7 602 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 GPR22Q99680 433 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 MGLLQ99685 303 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 ATF6BQ99941 703 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 MRPL45Q9BRJ2 306 aaKnown RBP1.58□□□□□ -2.16
LINC02540-201ENST00000455554 GINS3Q9BRX5 216 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF649Q9BS31 505 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF670Q9BS34 389 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 CHCHD5Q9BSY4 110 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 PSMG3Q9BT73 122 aaPredicted RBP1.58□□□□□ -2.16
LINC02540-201ENST00000455554 C20orf24Q9BUV8 137 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 HCAR1Q9BXC0 346 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 CDCA4Q9BXL8 241 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 RSPO3Q9BXY4 272 aaPredicted RBP1.58□□□□□ -2.16
LINC02540-201ENST00000455554 ULBP2Q9BZM5 246 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 FXYD6Q9H0Q3 95 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 GABARAPL1Q9H0R8 117 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 GTSF1LQ9H1H1 148 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 NMRAL1Q9HBL8 299 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 AMBNQ9NP70 447 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 EXOSC4Q9NPD3 245 aaKnown RBP1.58□□□□□ -2.16
LINC02540-201ENST00000455554 SPANXA1Q9NS26 97 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 TXNL4BQ9NX01 149 aaKnown RBP1.58□□□□□ -2.16
LINC02540-201ENST00000455554 MRPL16Q9NX20 251 aaKnown RBP1.58□□□□□ -2.16
LINC02540-201ENST00000455554 TAS2R5Q9NYW4 299 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 SLC23A2Q9UGH3 650 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 HSPB8Q9UJY1 196 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 ERG28Q9UKR5 140 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 LAMTOR2Q9Y2Q5 125 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 MRPS16Q9Y3D3 137 aaKnown RBP1.58□□□□□ -2.16
LINC02540-201ENST00000455554 STYXL1Q9Y6J8 313 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 ATAD5Q96QE3 1844 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 FRMPD1Q5SYB0 1578 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 VWDEQ8N2E2 1590 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 PTPRJQ12913 1337 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 CACNA1SQ13698 1873 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 PIK3C2BO00750 1634 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 USP32Q8NFA0 1604 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 PHRF1Q9P1Y6 1649 aaKnown RBP1.58□□□□□ -2.16
LINC02540-201ENST00000455554 MAP3K4Q9Y6R4 1608 aa1.58□□□□□ -2.16
LINC02540-201ENST00000455554 C4AP0C0L4 1744 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 C4BP0C0L5 1744 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 CPS1P31327 1500 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 NEXMIFQ5QGS0 1516 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 CCDC88AQ3V6T2 1871 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 SAMD9LQ8IVG5 1584 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 A0A087WWC5 75 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 TRAV38-1A0A0B4J264 116 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 IGHV3-16A0A0C4DH30 117 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 IGHV1-69-2A0A0G2JMI3 117 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 A0A0G2JMM0 328 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 LOC285095A0A1B0GVY8 99 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 A0A1W2PPB8 328 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 A0A1W2PPV9 198 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 KANTRA0A1W2PQU2 76 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 TMEM189A5PLL7 270 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 GGT3PA6NGU5 568 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 FRG2CA6NGY1 282 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF705FA8MVS1 300 aaPredicted RBP1.57□□□□□ -2.16
LINC02540-201ENST00000455554 KIR3DP1A8MWS1 328 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 SHISA9B4DS77 424 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 C21orf140B9A014 251 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 C9JQL5 133 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 F5H5P2 479 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 F5H768 121 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 H3BQ15 152 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 C15orf65H3BRN8 121 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 APOC4-APOC2K7ER74 178 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 FXYD1O00168 92 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 TNFRSF11BO00300 401 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 SAP18O00422 153 aaKnown RBP1.57□□□□□ -2.16
LINC02540-201ENST00000455554 GABRPO00591 440 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 LATO43561 262 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 YPEL1O60688 119 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 CLDN11O75508 207 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 FOXH1O75593 365 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 HAND1O96004 215 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 NRASP01111 189 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 IFNA1P01562 189 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 HBZP02008 142 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 TRGC2P03986 189 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 MAS1P04201 325 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 CTSLP07711 333 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 CD55P08174 381 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 CXCL1P09341 107 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 CT62P0C5K7 136 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 IGLC1P0CG04 106 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF705DP0CH99 300 aaPredicted RBP1.57□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF705BP0CI00 300 aaPredicted RBP1.57□□□□□ -2.16
LINC02540-201ENST00000455554 PGA4P0DJD7 388 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 PGA5P0DJD9 388 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 SLC25A4P12235 298 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 PSMB1P20618 241 aaKnown RBP1.57□□□□□ -2.16
LINC02540-201ENST00000455554 COX5AP20674 150 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 HTR1EP28566 365 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 HTR1FP30939 366 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 SNCAP37840 140 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 LEPP41159 167 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 CDKN2BP42772 138 aa1.57□□□□□ -2.16
LINC02540-201ENST00000455554 OR3A4PP47883 348 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms