RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 MIOXQ9UGB7 285 aa16.83■□□□□ 0.28
PCDHA13-203ENST00000617769 OR14J1Q9UGF5 321 aa16.83■□□□□ 0.28
PCDHA13-203ENST00000617769 ATMQ13315 3056 aa16.83■□□□□ 0.28
PCDHA13-203ENST00000617769 CHD3Q12873 2000 aaKnown RBP16.83■□□□□ 0.28
PCDHA13-203ENST00000617769 LRP5LA4QPB2 252 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 SELEP16581 610 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 MDH2P40926 338 aaKnown RBP16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 CD200P41217 278 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 GLIPR1P48060 266 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 FOXF2Q12947 444 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 FAM90A2PQ658T7 463 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 FAM180AQ6UWF9 173 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 IGFL2Q6UWQ7 119 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 C9orf106Q8NAJ2 232 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 TAAR6Q96RI8 345 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 LIN7CQ9NUP9 197 aaKnown RBP16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 TREM2Q9NZC2 230 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 DMXL2Q8TDJ6 3036 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 PTPRZ1P23471 2315 aaPredicted RBP16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 TRAV17A0A0B4J275 112 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 AGFG2O95081 481 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 ALKBH6Q3KRA9 238 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 SPANXN5Q5MJ07 72 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 FAM214BQ7L5A3 538 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 MOB1BQ7L9L4 216 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 LILRB2Q8N423 598 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 DRAM1Q8N682 238 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 TMPRSS5Q9H3S3 457 aa16.82■□□□□ 0.28
PCDHA13-203ENST00000617769 BCL2P10415 239 aa16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 ERVK11-1P61568 191 aa16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 NANOS1Q8WY41 292 aaKnown RBP16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 RCC1LQ96I51 464 aaKnown RBP16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 SIRT7Q9NRC8 400 aa16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 CXorf65A6NEN9 183 aa16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 CYB5BO43169 146 aa16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 NXPH2O95156 264 aa16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 HOXA5P20719 270 aa16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 NDUFA6P56556 154 aa16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 UBE2NP61088 152 aaKnown RBP16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 TBC1D28Q2M2D7 210 aa16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 LRRC75BQ2VPJ9 315 aa16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 OR10G4Q8NGN3 311 aa16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 DOK5Q9P104 306 aa16.81■□□□□ 0.28
PCDHA13-203ENST00000617769 IFITM10A6NMD0 228 aa16.8■□□□□ 0.28
PCDHA13-203ENST00000617769 PRR33A8MZF0 331 aa16.8■□□□□ 0.28
PCDHA13-203ENST00000617769 CEBPDP49716 269 aaPredicted RBP16.8■□□□□ 0.28
PCDHA13-203ENST00000617769 HBG1P69891 147 aa16.8■□□□□ 0.28
PCDHA13-203ENST00000617769 HBG2P69892 147 aa16.8■□□□□ 0.28
PCDHA13-203ENST00000617769 OR51M1Q9H341 326 aa16.8■□□□□ 0.28
PCDHA13-203ENST00000617769 CISD1Q9NZ45 108 aaKnown RBP16.8■□□□□ 0.28
PCDHA13-203ENST00000617769 HNF4GQ14541 408 aa16.8■□□□□ 0.28
PCDHA13-203ENST00000617769 FGFRL1Q8N441 504 aa16.8■□□□□ 0.28
PCDHA13-203ENST00000617769 OR4C12Q96R67 309 aa16.8■□□□□ 0.28
PCDHA13-203ENST00000617769 PSMG3Q9BT73 122 aaPredicted RBP16.8■□□□□ 0.28
PCDHA13-203ENST00000617769 MBNL3Q9NUK0 354 aaKnown RBP16.8■□□□□ 0.28
PCDHA13-203ENST00000617769 POLDIP2Q9Y2S7 368 aa16.8■□□□□ 0.28
PCDHA13-203ENST00000617769 CACNA1DQ01668 2161 aa16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 CACNA1GO43497 2377 aa16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 KIR2DL2P43627 348 aaPredicted RBP16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 ELLP55199 621 aaPredicted RBP16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 PPP1CBP62140 327 aa16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 Q8IYB0 196 aa16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 ZNF610Q8N9Z0 462 aa16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 MBD3L1Q8WWY6 194 aa16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 TOLLIPQ9H0E2 274 aa16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 SMPD2O60906 423 aa16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 GRPP07492 148 aa16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 PGA5P0DJD9 388 aa16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 PLA2G5P39877 138 aa16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 FAM53AQ6NSI3 398 aaPredicted RBP16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 WDR61Q9GZS3 305 aaKnown RBP16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 RNF150Q9ULK6 438 aa16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 MAP1BP46821 2468 aaKnown RBP16.79■□□□□ 0.28
PCDHA13-203ENST00000617769 RAMP3O60896 148 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 TRGC2P03986 189 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 HOXA4Q00056 320 aaPredicted RBP16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 ZNF146Q15072 292 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 GABRA6Q16445 453 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 OR8G2PQ6IF36 304 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 CA5BP1Q8WTZ4 195 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 GGACTQ9BVM4 153 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 USF3Q68DE3 2245 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 NBEAQ8NFP9 2946 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 UBE2L5PA0A1B0GUS4 154 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 SH2D1BO14796 132 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 HIST1H2BKO60814 126 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 HIST1H2BJP06899 126 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 HIST1H2BOP23527 126 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 HIST1H2BBP33778 126 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 CDX1P47902 265 aaPredicted RBP16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 HIST1H2BDP58876 126 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 HIST1H2BCP62807 126 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 SERF2P84101 59 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 HIST2H2BEQ16778 126 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 OR2B11Q5JQS5 317 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 HIST1H2BHQ93079 126 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 HIST1H2BNQ99877 126 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 HIST1H2BMQ99879 126 aa16.78■□□□□ 0.28
PCDHA13-203ENST00000617769 WIPI2Q9Y4P8 454 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms