RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 LRRC6Q86X45 466 aa1.13□□□□□ -2.23
TRAPPC11-210ENST00000513600 CDRT4Q8N9R6 151 aa1.13□□□□□ -2.23
TRAPPC11-210ENST00000513600 LRRC39Q96DD0 335 aa1.13□□□□□ -2.23
TRAPPC11-210ENST00000513600 CHST5Q9GZS9 411 aa1.13□□□□□ -2.23
TRAPPC11-210ENST00000513600 CLUHO75153 1309 aa1.13□□□□□ -2.23
TRAPPC11-210ENST00000513600 TRBV6-5A0A0K0K1A5 114 aa1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 OR5K4A6NMS3 321 aa1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 UBE2L6O14933 153 aa1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 ZNF728P0DKX0 622 aa1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 CDK2P24941 298 aa1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 IDH3GP51553 393 aaPredicted RBP1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 TNNC1P63316 161 aa1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 GTF2BQ00403 316 aa1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 GLO1Q04760 184 aa1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 ZNF791Q3KP31 576 aaPredicted RBP1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 TMEM31Q5JXX7 168 aa1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 NAA40Q86UY6 237 aa1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 CCDC112Q8NEF3 446 aa1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 COMMD9Q9P000 198 aa1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 HHLA2Q9UM44 414 aa1.12□□□□□ -2.23
TRAPPC11-210ENST00000513600 ADAMTSL1Q8N6G6 1762 aa1.11□□□□□ -2.23
TRAPPC11-210ENST00000513600 ATAD5Q96QE3 1844 aa1.11□□□□□ -2.23
TRAPPC11-210ENST00000513600 OR11H12B2RN74 326 aa1.11□□□□□ -2.23
TRAPPC11-210ENST00000513600 IGHV1-69P01742 117 aa1.11□□□□□ -2.23
TRAPPC11-210ENST00000513600 FGF12P61328 243 aa1.11□□□□□ -2.23
TRAPPC11-210ENST00000513600 OR11H2Q8NH07 326 aa1.11□□□□□ -2.23
TRAPPC11-210ENST00000513600 LRRC20Q8TCA0 184 aa1.11□□□□□ -2.23
TRAPPC11-210ENST00000513600 RAB1BQ9H0U4 201 aa1.11□□□□□ -2.23
TRAPPC11-210ENST00000513600 MED28Q9H204 178 aa1.11□□□□□ -2.23
TRAPPC11-210ENST00000513600 STK38LQ9Y2H1 464 aa1.11□□□□□ -2.23
TRAPPC11-210ENST00000513600 CCDC88CQ9P219 2028 aa1.11□□□□□ -2.23
TRAPPC11-210ENST00000513600 FN1P02751 2386 aaKnown RBP1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 IGKV3-7A0A075B6H7 116 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 M0QYV0 167 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 C1QCP02747 245 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 CCL3P10147 92 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 IL9P15248 144 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 CRYBB3P26998 211 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 NUP62P37198 522 aaPredicted RBP1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 XCL1P47992 114 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 TAS2R45P59539 299 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 TMEM155Q4W5P6 130 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 AMTNQ6UX39 209 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 OR2Y1Q8NGV0 311 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 Q96M85 177 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 HHLA3Q9XRX5 114 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 FAM215AQ9Y5M1 114 aa1.1□□□□□ -2.23
TRAPPC11-210ENST00000513600 TRGV5A0A0B4J1U4 118 aa1.09□□□□□ -2.23
TRAPPC11-210ENST00000513600 A0A1W2PQD3 144 aa1.09□□□□□ -2.23
TRAPPC11-210ENST00000513600 SLC17A3O00476 420 aa1.09□□□□□ -2.23
TRAPPC11-210ENST00000513600 LDOC1O95751 146 aaPredicted RBP1.09□□□□□ -2.23
TRAPPC11-210ENST00000513600 BPGMP07738 259 aa1.09□□□□□ -2.23
TRAPPC11-210ENST00000513600 CD7P09564 240 aa1.09□□□□□ -2.23
TRAPPC11-210ENST00000513600 OPRM1P35372 400 aa1.09□□□□□ -2.23
TRAPPC11-210ENST00000513600 XIAPP98170 497 aa1.09□□□□□ -2.23
TRAPPC11-210ENST00000513600 FAM3AP98173 230 aa1.09□□□□□ -2.23
TRAPPC11-210ENST00000513600 DRAM2Q6UX65 266 aa1.09□□□□□ -2.23
TRAPPC11-210ENST00000513600 CNEP1R1Q8N9A8 125 aa1.09□□□□□ -2.23
TRAPPC11-210ENST00000513600 TMEM239Q8WW34 195 aa1.09□□□□□ -2.23
TRAPPC11-210ENST00000513600 CYGBQ8WWM9 190 aa1.09□□□□□ -2.23
TRAPPC11-210ENST00000513600 ZNF469Q96JG9 3925 aaPredicted RBP1.09□□□□□ -2.24
TRAPPC11-210ENST00000513600 MYO5BQ9ULV0 1848 aa1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 H0YC42 278 aa1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 PGLYRP1O75594 196 aaPredicted RBP1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 PSMG1O95456 288 aa1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 UCHL1P09936 223 aa1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 OR13C7P0DN81 318 aa1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 PRB4P10163 310 aaPredicted RBP1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 CTBP2P56545 445 aa1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 RAB31Q13636 194 aa1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 C18orf21Q32NC0 220 aaPredicted RBP1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 CCDC127Q96BQ5 260 aa1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 TAMM41Q96BW9 452 aa1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 SLC35G5Q96KT7 338 aa1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 NOTCH1P46531 2555 aa1.08□□□□□ -2.24
TRAPPC11-210ENST00000513600 DNMT1P26358 1616 aaKnown RBP1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 TENM3Q9P273 2699 aa1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 A0A1B0GX12 115 aa1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 ZNF737O75373 536 aa1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 NQO2P16083 231 aa1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 OR10A3P58181 314 aa1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 C1DQ13901 141 aaKnown RBP1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 NNATQ16517 81 aa1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 TBC1D28Q2M2D7 210 aa1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 UNQ6190/PRO20217Q6UXQ8 127 aa1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 ST13P4Q8IZP2 240 aaPredicted RBP1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 SLC2A9Q9NRM0 540 aa1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 MAT2BQ9NZL9 334 aa1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 SNX10Q9Y5X0 201 aa1.07□□□□□ -2.24
TRAPPC11-210ENST00000513600 TXNDC9O14530 226 aa1.06□□□□□ -2.24
TRAPPC11-210ENST00000513600 CRPP02741 224 aa1.06□□□□□ -2.24
TRAPPC11-210ENST00000513600 CARD18P57730 90 aa1.06□□□□□ -2.24
TRAPPC11-210ENST00000513600 TMEM42Q69YG0 159 aa1.06□□□□□ -2.24
TRAPPC11-210ENST00000513600 PLCZ1Q86YW0 608 aa1.06□□□□□ -2.24
TRAPPC11-210ENST00000513600 OR51H1Q8NH63 302 aa1.06□□□□□ -2.24
TRAPPC11-210ENST00000513600 ASB17Q8WXJ9 295 aa1.06□□□□□ -2.24
TRAPPC11-210ENST00000513600 NRBP2Q9NSY0 501 aa1.06□□□□□ -2.24
TRAPPC11-210ENST00000513600 GLS2Q9UI32 602 aa1.06□□□□□ -2.24
TRAPPC11-210ENST00000513600 DISP1Q96F81 1524 aa1.05□□□□□ -2.24
TRAPPC11-210ENST00000513600 PHYHO14832 338 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms