RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 VSIRQ9H7M9 311 aa16.32■□□□□ 0.2
LIN54-209ENST00000510557 C5orf49A4QMS7 147 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 MAP1LC3B2A6NCE7 125 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 H0Y980 276 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 NXPH3O95157 252 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 IGHV3-9P01782 118 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 SSX7Q7RTT5 188 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 MAFAQ8NHW3 353 aaPredicted RBP16.31■□□□□ 0.2
LIN54-209ENST00000510557 ANAPC16Q96DE5 110 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 MIEN1Q9BRT3 115 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 ZPBPQ9BS86 351 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 MAP1LC3BQ9GZQ8 125 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 ARR3P36575 388 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 PAX9P55771 341 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 PLPPR1Q8TBJ4 325 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 FAM173AQ9BQD7 235 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 C20orf144Q9BQM9 153 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 NCKAP5O14513 1909 aa16.31■□□□□ 0.2
LIN54-209ENST00000510557 LNP1A1A4G5 178 aa16.3■□□□□ 0.2
LIN54-209ENST00000510557 ZNF737O75373 536 aa16.3■□□□□ 0.2
LIN54-209ENST00000510557 SYNGR4O95473 234 aa16.3■□□□□ 0.2
LIN54-209ENST00000510557 SRP14P37108 136 aaKnown RBP16.3■□□□□ 0.2
LIN54-209ENST00000510557 BATF2Q8N1L9 274 aa16.3■□□□□ 0.2
LIN54-209ENST00000510557 ZCCHC14Q8WYQ9 949 aaKnown RBP16.3■□□□□ 0.2
LIN54-209ENST00000510557 PSMG3Q9BT73 122 aaPredicted RBP16.3■□□□□ 0.2
LIN54-209ENST00000510557 MTCH1Q9NZJ7 389 aa16.3■□□□□ 0.2
LIN54-209ENST00000510557 SDK2Q58EX2 2172 aa16.3■□□□□ 0.2
LIN54-209ENST00000510557 TRBV6-6A0A0A6YYG2 114 aa16.3■□□□□ 0.2
LIN54-209ENST00000510557 PINLYPA6NC86 204 aa16.3■□□□□ 0.2
LIN54-209ENST00000510557 MDH2P40926 338 aaKnown RBP16.3■□□□□ 0.2
LIN54-209ENST00000510557 COTL1Q14019 142 aa16.3■□□□□ 0.2
LIN54-209ENST00000510557 CT55Q8WUE5 264 aa16.3■□□□□ 0.2
LIN54-209ENST00000510557 RPUSD4Q96CM3 377 aaKnown RBP16.3■□□□□ 0.2
LIN54-209ENST00000510557 IMMP2LQ96T52 175 aa16.3■□□□□ 0.2
LIN54-209ENST00000510557 PARD6AQ9NPB6 346 aa16.3■□□□□ 0.2
LIN54-209ENST00000510557 PATE3B3GLJ2 98 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 IL6RP08887 468 aaPredicted RBP16.29■□□□□ 0.2
LIN54-209ENST00000510557 SLC25A6P12236 298 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 MEF2BQ02080 365 aaPredicted RBP16.29■□□□□ 0.2
LIN54-209ENST00000510557 RTP5Q14D33 572 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 PRSS8Q16651 343 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 KCNIP4Q6PIL6 250 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 CCL28Q9NRJ3 127 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 RNF115Q9Y4L5 304 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 YLPM1P49750 1951 aaKnown RBP16.29■□□□□ 0.2
LIN54-209ENST00000510557 LRP5LA4QPB2 252 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 TNFSF12O43508 249 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 SELEP16581 610 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 CD82P27701 267 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 WNT5AP41221 380 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 TMEM267Q0VDI3 215 aaPredicted RBP16.29■□□□□ 0.2
LIN54-209ENST00000510557 FAM180AQ6UWF9 173 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 SDSLQ96GA7 329 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 OR2J1Q9GZK6 312 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 SHANK1Q9Y566 2161 aa16.29■□□□□ 0.2
LIN54-209ENST00000510557 A0A096LPE4 126 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 IGKV1D-13A0A0B4J2D9 117 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 A0A1W2PPZ6 126 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 PGLYRP1O75594 196 aaPredicted RBP16.28■□□□□ 0.2
LIN54-209ENST00000510557 TNFSF13O75888 250 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 IGKV1-13P0DP09 117 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 TDGF1P13385 188 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 TNFSF10P50591 281 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 RANP62826 216 aaKnown RBP16.28■□□□□ 0.2
LIN54-209ENST00000510557 PLP2Q04941 152 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 OR5I1Q13606 314 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 PSMF1Q92530 271 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 H3BP45 60 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 SIAH2O43255 324 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 SS18L1O75177 396 aaPredicted RBP16.28■□□□□ 0.2
LIN54-209ENST00000510557 LHX2P50458 406 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 SRYQ05066 204 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 TMEM41BQ5BJD5 291 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 SPINK14Q6IE38 97 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 OR2M7Q8NG81 312 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 FGF23Q9GZV9 251 aaPredicted RBP16.28■□□□□ 0.2
LIN54-209ENST00000510557 MPC1Q9Y5U8 109 aa16.28■□□□□ 0.2
LIN54-209ENST00000510557 OR5B21A6NL26 309 aa16.27■□□□□ 0.2
LIN54-209ENST00000510557 ANKRD30BLA7E2S9 258 aa16.27■□□□□ 0.2
LIN54-209ENST00000510557 TMEM250H0YL14 139 aa16.27■□□□□ 0.2
LIN54-209ENST00000510557 F2RP25116 425 aa16.27■□□□□ 0.2
LIN54-209ENST00000510557 SERF2P84101 59 aa16.27■□□□□ 0.2
LIN54-209ENST00000510557 BATFQ16520 125 aa16.27■□□□□ 0.2
LIN54-209ENST00000510557 TOMM20LQ6UXN7 152 aa16.27■□□□□ 0.2
LIN54-209ENST00000510557 TUSC5Q8IXB3 177 aa16.27■□□□□ 0.2
LIN54-209ENST00000510557 ZNF703Q9H7S9 590 aaPredicted RBP16.27■□□□□ 0.2
LIN54-209ENST00000510557 OR2W1Q9Y3N9 320 aa16.27■□□□□ 0.2
LIN54-209ENST00000510557 LOXL2Q9Y4K0 774 aa16.27■□□□□ 0.2
LIN54-209ENST00000510557 TCF21O43680 179 aa16.26■□□□□ 0.19
LIN54-209ENST00000510557 ACP1P24666 158 aa16.26■□□□□ 0.19
LIN54-209ENST00000510557 LCN2P80188 198 aa16.26■□□□□ 0.19
LIN54-209ENST00000510557 OR5P3Q8WZ94 311 aa16.26■□□□□ 0.19
LIN54-209ENST00000510557 APH1AQ96BI3 265 aa16.26■□□□□ 0.19
LIN54-209ENST00000510557 PINX1Q96BK5 328 aaKnown RBP16.26■□□□□ 0.19
LIN54-209ENST00000510557 PRRG4Q9BZD6 226 aa16.26■□□□□ 0.19
LIN54-209ENST00000510557 PARLQ9H300 379 aa16.26■□□□□ 0.19
LIN54-209ENST00000510557 TAAR3PQ9P1P4 343 aa16.26■□□□□ 0.19
LIN54-209ENST00000510557 ABI3Q9P2A4 366 aa16.26■□□□□ 0.19
LIN54-209ENST00000510557 CHD3Q12873 2000 aaKnown RBP16.26■□□□□ 0.19
LIN54-209ENST00000510557 LAMTOR5O43504 91 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms