RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 ORM2P19652 201 aa1.21□□□□□ -2.22
TRAPPC11-210ENST00000513600 TSPEAR-AS2P59090 65 aa1.21□□□□□ -2.22
TRAPPC11-210ENST00000513600 ACTBP60709 375 aa1.21□□□□□ -2.22
TRAPPC11-210ENST00000513600 ACTG1P63261 375 aa1.21□□□□□ -2.22
TRAPPC11-210ENST00000513600 RELAQ04206 551 aa1.21□□□□□ -2.22
TRAPPC11-210ENST00000513600 CENPWQ5EE01 88 aa1.21□□□□□ -2.22
TRAPPC11-210ENST00000513600 ANGPTL6Q8NI99 470 aa1.21□□□□□ -2.22
TRAPPC11-210ENST00000513600 SPACA4Q8TDM5 124 aa1.21□□□□□ -2.22
TRAPPC11-210ENST00000513600 OR5P2Q8WZ92 322 aa1.21□□□□□ -2.22
TRAPPC11-210ENST00000513600 NYNRINQ9P2P1 1898 aaKnown RBP1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 SDK1Q7Z5N4 2213 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 ABCB11O95342 1321 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 RFPL4AA6NLU0 287 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 RFPL4AL1F8VTS6 287 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 OTCP00480 354 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 GADD45AP24522 165 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 C1QTNF8P60827 252 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 SLC38A11Q08AI6 406 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 HSP90B2PQ58FF3 399 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 YIPF7Q8N8F6 280 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 OR8B12Q8NGG6 310 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 C11orf1Q9H5F2 150 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 METTL8Q9H825 291 aaKnown RBP1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 CLEC2DQ9UHP7 191 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 DNAJC12Q9UKB3 198 aa1.2□□□□□ -2.22
TRAPPC11-210ENST00000513600 RAB19A4D1S5 217 aa1.19□□□□□ -2.22
TRAPPC11-210ENST00000513600 LINC00862A6NCI5 91 aa1.19□□□□□ -2.22
TRAPPC11-210ENST00000513600 ZW10O43264 779 aa1.19□□□□□ -2.22
TRAPPC11-210ENST00000513600 ZNF705DP0CH99 300 aaPredicted RBP1.19□□□□□ -2.22
TRAPPC11-210ENST00000513600 ZNF705BP0CI00 300 aaPredicted RBP1.19□□□□□ -2.22
TRAPPC11-210ENST00000513600 CCNOP22674 350 aa1.19□□□□□ -2.22
TRAPPC11-210ENST00000513600 CRHBPP24387 322 aa1.19□□□□□ -2.22
TRAPPC11-210ENST00000513600 RNF133Q8WVZ7 376 aa1.19□□□□□ -2.22
TRAPPC11-210ENST00000513600 TBX5Q99593 518 aa1.19□□□□□ -2.22
TRAPPC11-210ENST00000513600 IGKV2-40A0A087WW87 121 aaPredicted RBP1.18□□□□□ -2.22
TRAPPC11-210ENST00000513600 CSTAP01040 98 aa1.18□□□□□ -2.22
TRAPPC11-210ENST00000513600 IGKV2D-40P01614 121 aaPredicted RBP1.18□□□□□ -2.22
TRAPPC11-210ENST00000513600 ATP6V0CP27449 155 aa1.18□□□□□ -2.22
TRAPPC11-210ENST00000513600 PRB3Q04118 309 aaPredicted RBP1.18□□□□□ -2.22
TRAPPC11-210ENST00000513600 PSG3Q16557 428 aa1.18□□□□□ -2.22
TRAPPC11-210ENST00000513600 BSXQ3C1V8 233 aa1.18□□□□□ -2.22
TRAPPC11-210ENST00000513600 TRMT12Q53H54 448 aaKnown RBP1.18□□□□□ -2.22
TRAPPC11-210ENST00000513600 AHSA2Q719I0 299 aa1.18□□□□□ -2.22
TRAPPC11-210ENST00000513600 MIEN1Q9BRT3 115 aa1.18□□□□□ -2.22
TRAPPC11-210ENST00000513600 GOLPH3Q9H4A6 298 aa1.18□□□□□ -2.22
TRAPPC11-210ENST00000513600 TMEM216Q9P0N5 145 aa1.18□□□□□ -2.22
TRAPPC11-210ENST00000513600 COL6A6A6NMZ7 2263 aa1.18□□□□□ -2.22
TRAPPC11-210ENST00000513600 PLCH2O75038 1416 aa1.17□□□□□ -2.22
TRAPPC11-210ENST00000513600 TRAV41A0A0B4J266 112 aa1.17□□□□□ -2.22
TRAPPC11-210ENST00000513600 A0A1B0GW15 77 aa1.17□□□□□ -2.22
TRAPPC11-210ENST00000513600 CRXO43186 299 aaPredicted RBP1.17□□□□□ -2.22
TRAPPC11-210ENST00000513600 PSMB3P49720 205 aa1.17□□□□□ -2.22
TRAPPC11-210ENST00000513600 XRCC4Q13426 336 aa1.17□□□□□ -2.22
TRAPPC11-210ENST00000513600 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.17□□□□□ -2.22
TRAPPC11-210ENST00000513600 FNDC9Q8TBE3 224 aa1.17□□□□□ -2.22
TRAPPC11-210ENST00000513600 TRNT1Q96Q11 434 aaKnown RBP1.17□□□□□ -2.22
TRAPPC11-210ENST00000513600 MALRD1Q5VYJ5 2156 aa1.17□□□□□ -2.22
TRAPPC11-210ENST00000513600 TMSB15BA0A087X1C1 80 aa1.16□□□□□ -2.22
TRAPPC11-210ENST00000513600 EFCAB9A8MZ26 197 aa1.16□□□□□ -2.22
TRAPPC11-210ENST00000513600 SNAP29O95721 258 aa1.16□□□□□ -2.22
TRAPPC11-210ENST00000513600 SERPINB10P48595 397 aa1.16□□□□□ -2.22
TRAPPC11-210ENST00000513600 PABPC1L2AQ5JQF8 200 aa1.16□□□□□ -2.22
TRAPPC11-210ENST00000513600 CNPY4Q8N129 248 aa1.16□□□□□ -2.22
TRAPPC11-210ENST00000513600 OR5J2Q8NH18 312 aa1.16□□□□□ -2.22
TRAPPC11-210ENST00000513600 OR5K1Q8NHB7 308 aa1.16□□□□□ -2.22
TRAPPC11-210ENST00000513600 CIDECQ96AQ7 238 aaPredicted RBP1.16□□□□□ -2.22
TRAPPC11-210ENST00000513600 NXT1Q9UKK6 140 aaKnown RBP1.16□□□□□ -2.22
TRAPPC11-210ENST00000513600 ANGPT4Q9Y264 503 aa1.16□□□□□ -2.22
TRAPPC11-210ENST00000513600 RBMX2Q9Y388 322 aaKnown RBP1.16□□□□□ -2.22
TRAPPC11-210ENST00000513600 KDM5BQ9UGL1 1544 aa1.15□□□□□ -2.22
TRAPPC11-210ENST00000513600 STK16O75716 305 aa1.15□□□□□ -2.23
TRAPPC11-210ENST00000513600 TTC33Q6PID6 262 aaPredicted RBP1.15□□□□□ -2.23
TRAPPC11-210ENST00000513600 SLC35E3Q7Z769 313 aa1.15□□□□□ -2.23
TRAPPC11-210ENST00000513600 LHFPL1Q86WI0 220 aa1.15□□□□□ -2.23
TRAPPC11-210ENST00000513600 ABHD14BQ96IU4 210 aa1.15□□□□□ -2.23
TRAPPC11-210ENST00000513600 CYSTM1Q9H1C7 97 aa1.15□□□□□ -2.23
TRAPPC11-210ENST00000513600 SNX24Q9Y343 169 aa1.15□□□□□ -2.23
TRAPPC11-210ENST00000513600 ARHGAP32A7KAX9 2087 aa1.15□□□□□ -2.23
TRAPPC11-210ENST00000513600 RAB3GAP2Q9H2M9 1393 aa1.14□□□□□ -2.23
TRAPPC11-210ENST00000513600 IGKV3D-7A0A0C4DH55 119 aa1.14□□□□□ -2.23
TRAPPC11-210ENST00000513600 IGKV3OR2-268A0A0C4DH90 116 aa1.14□□□□□ -2.23
TRAPPC11-210ENST00000513600 MDFIC2A0A1B0GVS7 189 aa1.14□□□□□ -2.23
TRAPPC11-210ENST00000513600 OR10J3Q5JRS4 329 aa1.14□□□□□ -2.23
TRAPPC11-210ENST00000513600 TMEM75Q8N9X5 138 aa1.14□□□□□ -2.23
TRAPPC11-210ENST00000513600 OR4P4Q8NGL7 312 aa1.14□□□□□ -2.23
TRAPPC11-210ENST00000513600 ACBD6Q9BR61 282 aa1.14□□□□□ -2.23
TRAPPC11-210ENST00000513600 PRRG3Q9BZD7 231 aa1.14□□□□□ -2.23
TRAPPC11-210ENST00000513600 C8orf4Q9NR00 106 aa1.14□□□□□ -2.23
TRAPPC11-210ENST00000513600 LINC00527Q9UJ94 153 aa1.14□□□□□ -2.23
TRAPPC11-210ENST00000513600 MYO15BQ96JP2 1530 aa1.14□□□□□ -2.23
TRAPPC11-210ENST00000513600 ZNF532Q9HCE3 1301 aa1.14□□□□□ -2.23
TRAPPC11-210ENST00000513600 TNIKQ9UKE5 1360 aa1.13□□□□□ -2.23
TRAPPC11-210ENST00000513600 ZNF705FA8MVS1 300 aaPredicted RBP1.13□□□□□ -2.23
TRAPPC11-210ENST00000513600 GPR171O14626 319 aa1.13□□□□□ -2.23
TRAPPC11-210ENST00000513600 NPPCP23582 126 aa1.13□□□□□ -2.23
TRAPPC11-210ENST00000513600 OR1E2P47887 323 aa1.13□□□□□ -2.23
TRAPPC11-210ENST00000513600 TMEM258P61165 79 aa1.13□□□□□ -2.23
TRAPPC11-210ENST00000513600 FLOT2Q14254 428 aa1.13□□□□□ -2.23
TRAPPC11-210ENST00000513600 MTERF4Q7Z6M4 381 aaKnown RBP1.13□□□□□ -2.23
TRAPPC11-210ENST00000513600 MRPL52Q86TS9 123 aaKnown RBP1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms