RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 ACBD6Q9BR61 282 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 TXNDC17Q9BRA2 123 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 TTTY12Q9BZ98 90 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 ASCL3Q9NQ33 180 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 NRBP2Q9NSY0 501 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 OR51B4Q9Y5P0 310 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 DNMT1P26358 1616 aaKnown RBP1.28□□□□□ -2.2
LTN1-204ENST00000475344 ADAMTS7Q9UKP4 1686 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 DSCAMO60469 2012 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 PLXNA3P51805 1871 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 CRB1P82279 1406 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 MUC21A0A0G2JKD1 596 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 A0A0J9YX75 114 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 MUC21A0A140T8X8 626 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 C9J4A7 227 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 MPZL2O60487 215 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 NDUFS6O75380 124 aaKnown RBP1.27□□□□□ -2.21
LTN1-204ENST00000475344 ATP6V0CP27449 155 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 OPRM1P35372 400 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 PSMB3P49720 205 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 PSMD7P51665 324 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 BSPH1Q075Z2 132 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 PDGFRLQ15198 375 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 TRMT12Q53H54 448 aaKnown RBP1.27□□□□□ -2.21
LTN1-204ENST00000475344 XKRXQ6PP77 449 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 CCDC121Q6ZUS5 278 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 OR52E4Q8NGH9 312 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 ZNRF2Q8NHG8 242 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 SUN5Q8TC36 379 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 SMIM12Q96EX1 92 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 TMEM56Q96MV1 263 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 MED10Q9BTT4 135 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 MED18Q9BUE0 208 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 CDCA4Q9BXL8 241 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 MS4A12Q9NXJ0 267 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 PSMD13Q9UNM6 376 aa1.27□□□□□ -2.21
LTN1-204ENST00000475344 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.27□□□□□ -2.21
LTN1-204ENST00000475344 COL4A2P08572 1712 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 LRPPRCP42704 1394 aaKnown RBP1.26□□□□□ -2.21
LTN1-204ENST00000475344 CLUHO75153 1309 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 GRIFINA4D1Z8 144 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 LINC00862A6NCI5 91 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 HSBP1L1C9JCN9 74 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 MKRN2OSH3BPM6 223 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 SMLR1H3BR10 107 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 TRAPPC3O43617 180 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 ZNF189O75820 626 aaPredicted RBP1.26□□□□□ -2.21
LTN1-204ENST00000475344 CDK14O94921 469 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 NPPAP01160 153 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 RD3LP0DJH9 198 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 CDK2P24941 298 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 AGTR1P30556 359 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 KDELR2P33947 212 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 OR1E2P47887 323 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 FGF12P61328 243 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 DEFA6Q01524 100 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 SS18Q15532 418 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 SCGB1D4Q6XE38 83 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 SPATA24Q86W54 205 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 SYCE1Q8N0S2 351 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 YIPF7Q8N8F6 280 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 OR10A6Q8NH74 314 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 TNFAIP8L1Q8WVP5 186 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 ZNF251Q9BRH9 671 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 C1orf109Q9NX04 203 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 HHLA2Q9UM44 414 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 MRPS16Q9Y3D3 137 aaKnown RBP1.26□□□□□ -2.21
LTN1-204ENST00000475344 SNX10Q9Y5X0 201 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 STRCP1A6NGW2 1772 aa1.26□□□□□ -2.21
LTN1-204ENST00000475344 IGHV3-73A0A0B4J1V6 119 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 TMEM213A2RRL7 107 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 IQCF5A8MTL0 148 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 F8VZ95 297 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 GOLGA8RI6L899 631 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 STK16O75716 305 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 LY6HO94772 140 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 ASS1P00966 412 aaKnown RBP1.25□□□□□ -2.21
LTN1-204ENST00000475344 IGLV3-27P01718 113 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 CD7P09564 240 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 SLC25A16P16260 332 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 SULT1A2P50226 295 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 ZNF140P52738 457 aaPredicted RBP1.25□□□□□ -2.21
LTN1-204ENST00000475344 SLAMF1Q13291 335 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 PMS2P3Q13401 168 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 TMED1Q13445 227 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 C1DQ13901 141 aaKnown RBP1.25□□□□□ -2.21
LTN1-204ENST00000475344 ANGPT1Q15389 498 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 FAM229BQ4G0N7 80 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 CLEC6AQ6EIG7 209 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 CRLF3Q8IUI8 442 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 BOD1L2Q8IYS8 172 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 NATD1Q8N6N6 113 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 ATP6V1C2Q8NEY4 427 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 OR11H1Q8NG94 326 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 RNASE11Q8TAA1 199 aaKnown RBP1.25□□□□□ -2.21
LTN1-204ENST00000475344 C16orf78Q8WTQ4 265 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 MGLLQ99685 303 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 Q9BRP9 147 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 BBS2Q9BXC9 721 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 EIF5A2Q9GZV4 153 aaKnown RBP1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms