RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 MCEMP1Q8IX19 187 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 SIGLECL1Q8N7X8 197 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 PATE1Q8WXA2 126 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 WDR61Q9GZS3 305 aaKnown RBP11.04□□□□□ -0.64
PRPF4-201ENST00000374198 TRAV30A0A087WSZ9 112 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 TRAV34A0A0B4J273 112 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 KIAA1324LA8MWY0 1029 aaPredicted RBP11.04□□□□□ -0.64
PRPF4-201ENST00000374198 HOXB2P14652 356 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 MLF1P58340 268 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 GAPTQ8N292 157 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 ZNF586Q9NXT0 402 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 RNF24Q9Y225 148 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 KMT2EQ8IZD2 1858 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 ADAMTS9Q9P2N4 1935 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 C1QTNF9BB2RNN3 333 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 NRASP01111 189 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 KRASP01116 189 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 TNFSF4P23510 183 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 NPPCP23582 126 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 PLA2G5P39877 138 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 OR8B8Q15620 311 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 ZNF468Q5VIY5 522 aaPredicted RBP11.03□□□□□ -0.64
PRPF4-201ENST00000374198 HAPLN4Q86UW8 402 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 OOSP2Q86WS3 158 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 PRSS33Q8NF86 280 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 MRPS16Q9Y3D3 137 aaKnown RBP11.03□□□□□ -0.64
PRPF4-201ENST00000374198 A0A0U1RQV5 110 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 ADH1BP00325 375 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 OCIAD2Q56VL3 154 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 OR5D13Q8NGL4 314 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 ZNF721Q8TF20 911 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 MMABQ96EY8 250 aaPredicted RBP11.03□□□□□ -0.64
PRPF4-201ENST00000374198 LOXL4Q96JB6 756 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 SLC25A22Q9H936 323 aa11.03□□□□□ -0.64
PRPF4-201ENST00000374198 A0A0G2JRQ6 117 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 F2Z2F3 143 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 SH2D1BO14796 132 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 PAGE4O60829 102 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 GPX1P07203 203 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 TSPOP30536 169 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 HBG1P69891 147 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 HBG2P69892 147 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 PLCXD2Q0VAA5 305 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 PIGYQ3MUY2 71 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 LDLRAD2Q5SZI1 272 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 TAF15Q92804 592 aaKnown RBP eCLIP11.02□□□□□ -0.64
PRPF4-201ENST00000374198 NUDT11Q96G61 164 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 OR4C12Q96R67 309 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 FAM103A1Q9BTL3 118 aaKnown RBP11.02□□□□□ -0.64
PRPF4-201ENST00000374198 CST9LQ9H4G1 147 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 SLC35D1Q9NTN3 355 aa11.02□□□□□ -0.64
PRPF4-201ENST00000374198 CTXND1A0A1B0GTU2 59 aa11.02□□□□□ -0.65
PRPF4-201ENST00000374198 CBLN1P23435 193 aa11.02□□□□□ -0.65
PRPF4-201ENST00000374198 CTSSP25774 331 aa11.02□□□□□ -0.65
PRPF4-201ENST00000374198 Q0VG73 95 aa11.02□□□□□ -0.65
PRPF4-201ENST00000374198 PLPPR5Q32ZL2 321 aa11.02□□□□□ -0.65
PRPF4-201ENST00000374198 SAXO1Q8IYX7 474 aa11.02□□□□□ -0.65
PRPF4-201ENST00000374198 KLHDC1Q8N7A1 406 aa11.02□□□□□ -0.65
PRPF4-201ENST00000374198 TMEM234Q8WY98 164 aa11.02□□□□□ -0.65
PRPF4-201ENST00000374198 GPR146Q96CH1 333 aa11.02□□□□□ -0.65
PRPF4-201ENST00000374198 BMFQ96LC9 184 aa11.02□□□□□ -0.65
PRPF4-201ENST00000374198 PSENENQ9NZ42 101 aa11.02□□□□□ -0.65
PRPF4-201ENST00000374198 FAM166BA8MTA8 275 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 TMPRSS2O15393 492 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 LAMTOR5O43504 91 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 WDR1O75083 606 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 IGKV3-11P04433 115 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 SERPINA7P05543 415 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 C1QTNF9P0C862 333 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 TMEM211Q6ICI0 200 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 MUC6Q6W4X9 2439 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 TMPRSS7Q7RTY8 843 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 C1orf210Q8IVY1 113 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 CLDN23Q96B33 292 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 MRPL18Q9H0U6 180 aaKnown RBP11.01□□□□□ -0.65
PRPF4-201ENST00000374198 RPH3ALQ9UNE2 315 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 MYO7BQ6PIF6 2116 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 F5H5K5 113 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 IGHG1P01857 330 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 IAPPP10997 89 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 RPS20P60866 119 aaKnown RBP11.01□□□□□ -0.65
PRPF4-201ENST00000374198 TCF15Q12870 199 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 SLC25A47Q6Q0C1 308 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 CADM4Q8NFZ8 388 aa11.01□□□□□ -0.65
PRPF4-201ENST00000374198 CARD17Q5XLA6 110 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 HLA-DQA1Q5Y7H0 255 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 ACSM6Q6P461 480 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 TCTEX1D1Q8N7M0 179 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 OR56B2PQ8NGI1 322 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 OR10V1Q8NGI7 309 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 OR5P3Q8WZ94 311 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 C10orf35Q96D05 121 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 SFRP2Q96HF1 295 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 FBRSQ9HAH7 460 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 TBL2Q9Y4P3 447 aaKnown RBP11□□□□□ -0.65
PRPF4-201ENST00000374198 TIMM9Q9Y5J7 89 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 IGKV1-27A0A075B6S5 117 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 LIPT2A6NK58 231 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 H0Y8X5 98 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 H0Y980 276 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms