RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 HES4Q9HCC6 221 aa12.59□□□□□ -0.39
CHFR-202ENST00000315585 PLSCR4Q9NRQ2 329 aa12.59□□□□□ -0.39
CHFR-202ENST00000315585 LAMP3Q9UQV4 416 aa12.59□□□□□ -0.39
CHFR-202ENST00000315585 SSUH2Q9Y2M2 353 aa12.59□□□□□ -0.39
CHFR-202ENST00000315585 MUC6Q6W4X9 2439 aa12.59□□□□□ -0.39
CHFR-202ENST00000315585 WDR1O75083 606 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 OR13C7P0DN81 318 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 NHLH1Q02575 133 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 ZNF506Q5JVG8 444 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 SPSB3Q6PJ21 355 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 WDR86Q86TI4 376 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 ZNF645Q8N7E2 425 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 RBMXL3Q8N7X1 1067 aaKnown RBP12.58□□□□□ -0.4
CHFR-202ENST00000315585 OR10G4Q8NGN3 311 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 KLF14Q8TD94 323 aaPredicted RBP12.58□□□□□ -0.4
CHFR-202ENST00000315585 SCNM1Q9BWG6 230 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 PROCRQ9UNN8 238 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 MMP24Q9Y5R2 645 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 MBD3L4A6NDZ8 208 aaPredicted RBP12.58□□□□□ -0.4
CHFR-202ENST00000315585 MBD3L3A6NE82 208 aaPredicted RBP12.58□□□□□ -0.4
CHFR-202ENST00000315585 MBD3L5A6NJ08 208 aaPredicted RBP12.58□□□□□ -0.4
CHFR-202ENST00000315585 KIAA1324LA8MWY0 1029 aaPredicted RBP12.58□□□□□ -0.4
CHFR-202ENST00000315585 GFRA3O60609 400 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 SCAF4O95104 1147 aaKnown RBP12.58□□□□□ -0.4
CHFR-202ENST00000315585 IGKV3-15P01624 115 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 GRPP07492 148 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 ZNF16P17020 682 aaPredicted RBP12.58□□□□□ -0.4
CHFR-202ENST00000315585 IL2RGP31785 369 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 TRAT1Q6PIZ9 186 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 THNSL2Q86YJ6 484 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 MBD3L2Q8NHZ7 208 aaPredicted RBP12.58□□□□□ -0.4
CHFR-202ENST00000315585 PRR7Q8TB68 274 aa12.58□□□□□ -0.4
CHFR-202ENST00000315585 ZNF292O60281 2723 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 A0A1W2PR80 420 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 IFNL4K9M1U5 179 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 LYZL6O75951 148 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 IGLV2-14P01704 120 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 COX5AP20674 150 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 IGFBP7Q16270 282 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 FAM180AQ6UWF9 173 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 IQCF2Q8IXL9 164 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 MALSU1Q96EH3 234 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 TOLLIPQ9H0E2 274 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 ZFHX2Q9C0A1 2572 aaPredicted RBP12.57□□□□□ -0.4
CHFR-202ENST00000315585 CELA3BP08861 270 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 KRBOX4Q5JUW0 171 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 ODF3L1Q8IXM7 274 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 LILRB2Q8N423 598 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 DRAM1Q8N682 238 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 FAM216AQ8WUB2 273 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 NIPSNAP3BQ9BS92 247 aa12.57□□□□□ -0.4
CHFR-202ENST00000315585 RIF1Q5UIP0 2472 aaKnown RBP12.56□□□□□ -0.4
CHFR-202ENST00000315585 A0A087WWC5 75 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 A0A0G2JRQ6 117 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 RAB5AP20339 215 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 GCH1P30793 250 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 MAS1LP35410 378 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 P2RY6Q15077 328 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 ZNF718Q3SXZ3 478 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 PUS1Q9Y606 427 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHFR-202ENST00000315585 A0A1B0GV50 99 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 CXorf65A6NEN9 183 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 B4DEV8 164 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 NXPH3O95157 252 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 LY86O95711 162 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 IFNA17P01571 189 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 S100A8P05109 93 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 KITLGP21583 273 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 RPL35P42766 123 aaKnown RBP12.56□□□□□ -0.4
CHFR-202ENST00000315585 ATP6V1FQ16864 119 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 SMIM21Q3B7S5 101 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 BEND4Q6ZU67 534 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 SPACA3Q8IXA5 215 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 FGFRL1Q8N441 504 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 RARRES2Q99969 163 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 TCEAL7Q9BRU2 100 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 WASF3Q9UPY6 502 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 MSRB2Q9Y3D2 182 aa12.56□□□□□ -0.4
CHFR-202ENST00000315585 MED12LQ86YW9 2145 aa12.55□□□□□ -0.4
CHFR-202ENST00000315585 WISP2O76076 250 aa12.55□□□□□ -0.4
CHFR-202ENST00000315585 SRP19P09132 144 aaKnown RBP12.55□□□□□ -0.4
CHFR-202ENST00000315585 AGAP20933 346 aa12.55□□□□□ -0.4
CHFR-202ENST00000315585 ZNF585BQ52M93 769 aa12.55□□□□□ -0.4
CHFR-202ENST00000315585 SP5Q6BEB4 398 aaPredicted RBP12.55□□□□□ -0.4
CHFR-202ENST00000315585 VWA1Q6PCB0 445 aa12.55□□□□□ -0.4
CHFR-202ENST00000315585 SLC35E3Q7Z769 313 aa12.55□□□□□ -0.4
CHFR-202ENST00000315585 CIB3Q96Q77 187 aaPredicted RBP12.55□□□□□ -0.4
CHFR-202ENST00000315585 SIRT7Q9NRC8 400 aa12.55□□□□□ -0.4
CHFR-202ENST00000315585 DKK4Q9UBT3 224 aa12.55□□□□□ -0.4
CHFR-202ENST00000315585 ZNF98A6NK75 572 aa12.54□□□□□ -0.4
CHFR-202ENST00000315585 C1QTNF9BB2RNN3 333 aa12.54□□□□□ -0.4
CHFR-202ENST00000315585 TIMM8AO60220 97 aaPredicted RBP12.54□□□□□ -0.4
CHFR-202ENST00000315585 OR2C1O95371 312 aa12.54□□□□□ -0.4
CHFR-202ENST00000315585 IFNA1P01562 189 aa12.54□□□□□ -0.4
CHFR-202ENST00000315585 IGKV1-39P01597 117 aa12.54□□□□□ -0.4
CHFR-202ENST00000315585 IGKV1-5P01602 117 aa12.54□□□□□ -0.4
CHFR-202ENST00000315585 IGKV1D-39P04432 117 aa12.54□□□□□ -0.4
CHFR-202ENST00000315585 SPINK2P20155 84 aa12.54□□□□□ -0.4
CHFR-202ENST00000315585 UBE2KP61086 200 aa12.54□□□□□ -0.4
CHFR-202ENST00000315585 RUNX1Q01196 453 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms