RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 C17orf58Q2M2W7 97 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 C4orf46Q504U0 113 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 TMEM128Q5BJH2 165 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 TMEM200BQ69YZ2 307 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 ZNF787Q6DD87 383 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 ADAD2Q8NCV1 583 aaKnown RBP9.73□□□□□ -0.85
CLN6-223ENST00000637823 OR10A7Q8NGE5 316 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 OR52L2PQ8NGH6 319 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 OR52M1Q8NGK5 317 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 TOMM40LQ969M1 308 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 DACT3Q96B18 629 aaPredicted RBP9.73□□□□□ -0.85
CLN6-223ENST00000637823 SEC22CQ9BRL7 303 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 SLC5A7Q9GZV3 580 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 GAL3ST2Q9H3Q3 398 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 C5orf66Q9H5L9 145 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 OR2S2Q9NQN1 319 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 C19orf12Q9NSK7 152 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 RDH8Q9NYR8 311 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 ZNF221Q9UK13 617 aa9.73□□□□□ -0.85
CLN6-223ENST00000637823 HELZ2Q9BYK8 2649 aaKnown RBP9.73□□□□□ -0.85
CLN6-223ENST00000637823 GCN1Q92616 2671 aaKnown RBP9.72□□□□□ -0.85
CLN6-223ENST00000637823 TACC2O95359 2948 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 CREBL2O60519 120 aaPredicted RBP9.72□□□□□ -0.85
CLN6-223ENST00000637823 YPEL1O60688 119 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 PFDN1O60925 122 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 RGS11O94810 467 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 TRAPPC2P0DI81 140 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 TRAPPC2BP0DI82 140 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 ATP5J2P56134 94 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 RRAS2P62070 204 aaPredicted RBP9.72□□□□□ -0.85
CLN6-223ENST00000637823 C11orf91Q3C1V1 193 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 ABCA11PQ4W5N1 156 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 LY6G6FQ5SQ64 297 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 WDR25Q64LD2 544 aaPredicted RBP9.72□□□□□ -0.85
CLN6-223ENST00000637823 ZNF626Q68DY1 528 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 TCF23Q7RTU1 214 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 LYG2Q86SG7 212 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 ZNF525Q8N782 197 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 OR10V1Q8NGI7 309 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 ZNF431Q8TF32 576 aaPredicted RBP9.72□□□□□ -0.85
CLN6-223ENST00000637823 FAM216AQ8WUB2 273 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 SECTM1Q8WVN6 248 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 CAPSLQ8WWF8 208 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 MARVELD3Q96A59 401 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 YPEL2Q96QA6 119 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 MED28Q9H204 178 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 IDI2-AS1Q9NZ38 188 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 JPT1Q9UK76 154 aa9.72□□□□□ -0.85
CLN6-223ENST00000637823 ASH1LQ9NR48 2969 aaKnown RBP9.71□□□□□ -0.85
CLN6-223ENST00000637823 IGKV1D-13A0A0B4J2D9 117 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 MEX3AA1L020 520 aaKnown RBP9.71□□□□□ -0.86
CLN6-223ENST00000637823 C9orf170A2RU37 121 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 NDUFS8O00217 210 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 GPR31O00270 319 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 SSNA1O43805 119 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 SLC22A5O76082 557 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 IGKV1-13P0DP09 117 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 PI3P19957 117 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 GNRHRP30968 328 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 PPP1CCP36873 323 aaKnown RBP9.71□□□□□ -0.86
CLN6-223ENST00000637823 LOXL3P58215 753 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 DSCR9P59020 149 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 PPP1R1AQ13522 171 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 MORN2Q502X0 79 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 CD276Q5ZPR3 534 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 C11orf88Q6PI97 169 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 FAM185AQ8N0U4 392 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 CCDC71LQ8N9Z2 235 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 C8orf46Q8TAG6 207 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 FAM168AQ92567 244 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 TMEM230Q96A57 120 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 ZNF714Q96N38 554 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 GSX2Q9BZM3 304 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 RBM7Q9Y580 266 aaKnown RBP9.71□□□□□ -0.86
CLN6-223ENST00000637823 SPG11Q96JI7 2443 aa9.71□□□□□ -0.86
CLN6-223ENST00000637823 IGHV3-43A0A0B4J1X8 118 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 A0A1W2PPH5 198 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 CRYM-AS1A6NIL9 109 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 ITGB1BP1O14713 200 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 SFT2D2O95562 160 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 DUS4LO95620 317 aaKnown RBP9.7□□□□□ -0.86
CLN6-223ENST00000637823 OR8U9P0C7N5 309 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 IGHV3-43DP0DP04 118 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 S100GP29377 79 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 DLX6P56179 175 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 PIGPP57054 158 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 RND3P61587 244 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 GNB2P62879 340 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 DHRS2Q13268 280 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 ZNF273Q14593 569 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 GNMTQ14749 295 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 HEPN1Q6WQI6 88 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 LDLRAD3Q86YD5 345 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 SGPP2Q8IWX5 399 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 CMTM1Q8IZ96 169 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 C12orf45Q8N5I9 185 aaPredicted RBP9.7□□□□□ -0.86
CLN6-223ENST00000637823 OR52B4Q8NGK2 314 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 OR8U1Q8NH10 309 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 EDARADDQ8WWZ3 215 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 NRGNQ92686 78 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms