RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 VPREB3Q9UKI3 123 aa6.99□□□□□ -1.29
TRAPPC1-203ENST00000571739 A0A075B6Q4 140 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 IGKV1-6A0A0C4DH72 117 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 FAM90A9PA6NNJ1 464 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 CHST1O43916 411 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 YPEL1O60688 119 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 MDKP21741 143 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 HTD2P86397 168 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 FOXL1Q12952 345 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 GNMTQ14749 295 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 ZNF260Q3ZCT1 412 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 CDNFQ49AH0 187 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 AWAT1Q58HT5 328 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 GPR107Q5VW38 600 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 SLC25A48Q6ZT89 311 aaKnown RBP6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 ODF3L1Q8IXM7 274 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 C8orf31Q8N9H6 132 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 SETD6Q8TBK2 473 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 CREB3L1Q96BA8 519 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 GALMQ96C23 342 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 SLC25A38Q96DW6 304 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 RBMXL1Q96E39 390 aaKnown RBP6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 YPEL2Q96QA6 119 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 ZNF230Q9UIE0 474 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 SPATA2Q9UM82 520 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 TCF19Q9Y242 345 aa6.98□□□□□ -1.29
TRAPPC1-203ENST00000571739 IGKV1D-8A0A087WSZ0 117 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 A0A1W2PPI3 338 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 BTBD17A6NE02 478 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 POM121CA8CG34 1229 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 TMEM127O75204 238 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 TSPAN9O75954 239 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 GABARAPO95166 117 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 NDUFA7O95182 113 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 CRYBA1P05813 215 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 GSTT2P0CG29 244 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 GSTT2BP0CG30 244 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 HIST1H1DP16402 221 aaKnown RBP6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 PPP1CCP36873 323 aaKnown RBP6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 SERPINB10P48595 397 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 SCAND1P57086 179 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 RPL15P61313 204 aaKnown RBP6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 ATRQ13535 2644 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 Q3ZCU0 254 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 LY6G6FQ5SQ64 297 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 STEAP3Q658P3 488 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 C12orf54Q6X4T0 127 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 Q6ZS46 218 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 LINC01006Q8NI28 216 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 CFHR4Q92496 578 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 SLC25A46Q96AG3 418 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 PARP12Q9H0J9 701 aaKnown RBP6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 CHMP1AQ9HD42 196 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 C12orf4Q9NQ89 552 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 RHBDL2Q9NX52 303 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 ABRACLQ9P1F3 81 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 GNG12Q9UBI6 72 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 JPT1Q9UK76 154 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 MMP24Q9Y5R2 645 aa6.97□□□□□ -1.29
TRAPPC1-203ENST00000571739 SERPINE3A8MV23 424 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 OOSP1A8MZH6 123 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 TRDCB7Z8K6 153 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 SSX5O60225 188 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 PROP1O75360 226 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 FCGR3AP08637 254 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 CD3GP09693 182 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 BRS3P32247 399 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 CEACAM3P40198 252 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 CEACAM6P40199 344 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 REG1BP48304 166 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 ZNF137PP52743 207 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 RAG2P55895 527 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 KRTAP10-3P60369 221 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 BLCAPP62952 87 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 HLA-DRB3P79483 266 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 ZNF816Q0VGE8 651 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 MADCAM1Q13477 382 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 HABP2Q14520 560 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 HERPUD1Q15011 391 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 TMEM30BQ3MIR4 351 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 IGSF11Q5DX21 431 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 HACD4Q5VWC8 232 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 GPR141Q7Z602 305 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 TMEM219Q86XT9 240 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 THNSL2Q86YJ6 484 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 CROCCP3Q8IVE0 287 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 IZUMO1Q8IYV9 350 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 DRAM1Q8N682 238 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 DTX3Q8N9I9 347 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 OR10X1Q8NGY0 326 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 IL1F10Q8WWZ1 152 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 MAFIPQ8WZ33 124 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 TOMM40LQ969M1 308 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 RPEQ96AT9 228 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 ZNF251Q9BRH9 671 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 AGMATQ9BSE5 352 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 ABCG5Q9H222 651 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 C16orf95Q9H693 158 aa6.96□□□□□ -1.3
TRAPPC1-203ENST00000571739 RAB9BQ9NP90 201 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms