RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 SLC35F6Q8N357 371 aa1.29□□□□□ -2.2
TRAPPC11-210ENST00000513600 OR11L1Q8NGX0 322 aa1.29□□□□□ -2.2
TRAPPC11-210ENST00000513600 LGALS14Q8TCE9 139 aa1.29□□□□□ -2.2
TRAPPC11-210ENST00000513600 TMIGD2Q96BF3 282 aa1.29□□□□□ -2.2
TRAPPC11-210ENST00000513600 C11orf49Q9H6J7 331 aa1.29□□□□□ -2.2
TRAPPC11-210ENST00000513600 RMND1Q9NWS8 449 aa1.29□□□□□ -2.2
TRAPPC11-210ENST00000513600 DENND4BO75064 1496 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC11-210ENST00000513600 DHRS12A0PJE2 317 aa1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 VAPBO95292 243 aa1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 CRYGCP07315 174 aa1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 IGHV3-30-3P0DP02 117 aa1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 RAP1GDS1P52306 607 aa1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 DYNLL1P63167 89 aaKnown RBP1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 RASL11AQ6T310 242 aa1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 SSX6Q7RTT6 188 aa1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 ZNF283Q8N7M2 679 aa1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 OR5D18Q8NGL1 313 aa1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 MND1Q9BWT6 205 aa1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 CDCA4Q9BXL8 241 aa1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 C16orf95Q9H693 158 aa1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 RABL2AQ9UBK7 228 aaPredicted RBP1.28□□□□□ -2.2
TRAPPC11-210ENST00000513600 YLPM1P49750 1951 aaKnown RBP1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 GSTTP1A0A1W2PQM5 241 aa1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 C11orf86A6NJI1 115 aa1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 C8orf87E5RJ46 101 aa1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 H3BPC8 53 aa1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 SHOX2O60902 331 aaPredicted RBP1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 SFTPCP11686 197 aa1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 PTNP21246 168 aa1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 SULT1A2P50226 295 aa1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 VSNL1P62760 191 aa1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 HNRNPA1L2Q32P51 320 aaKnown RBP1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 C2orf91Q6ZV80 131 aa1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 BZW2Q9Y6E2 419 aaKnown RBP1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 TRPM6Q9BX84 2022 aa1.27□□□□□ -2.21
TRAPPC11-210ENST00000513600 UBFD1O14562 309 aaKnown RBP1.26□□□□□ -2.21
TRAPPC11-210ENST00000513600 ESDP10768 282 aa1.26□□□□□ -2.21
TRAPPC11-210ENST00000513600 TSPAN5P62079 268 aa1.26□□□□□ -2.21
TRAPPC11-210ENST00000513600 ERHP84090 104 aaKnown RBP1.26□□□□□ -2.21
TRAPPC11-210ENST00000513600 IFT81Q8WYA0 676 aa1.26□□□□□ -2.21
TRAPPC11-210ENST00000513600 FGF13Q92913 245 aa1.26□□□□□ -2.21
TRAPPC11-210ENST00000513600 UPK3BQ9BT76 320 aa1.26□□□□□ -2.21
TRAPPC11-210ENST00000513600 ZNF426Q9BUY5 554 aa1.26□□□□□ -2.21
TRAPPC11-210ENST00000513600 IFT46Q9NQC8 304 aa1.26□□□□□ -2.21
TRAPPC11-210ENST00000513600 KIF27Q86VH2 1401 aa1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 CDIPTO14735 213 aa1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 FABP7O15540 132 aa1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 ACTR1BP42025 376 aa1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 UBE2KP61086 200 aa1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 PAFAH1B3Q15102 231 aaKnown RBP1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 NKAIN1Q4KMZ8 207 aa1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 HENMT1Q5T8I9 393 aaKnown RBP1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 Q6ZTI0 123 aa1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 CATSPER2Q96P56 530 aa1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 C1QTNF6Q9BXI9 259 aa1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 METTL17Q9H7H0 456 aaPredicted RBP1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 PRO2289Q9P1D8 64 aa1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 NCKAP5O14513 1909 aa1.25□□□□□ -2.21
TRAPPC11-210ENST00000513600 EPPINO95925 133 aa1.24□□□□□ -2.21
TRAPPC11-210ENST00000513600 CTSEP14091 401 aa1.24□□□□□ -2.21
TRAPPC11-210ENST00000513600 ATF1P18846 271 aa1.24□□□□□ -2.21
TRAPPC11-210ENST00000513600 G6PCP35575 357 aa1.24□□□□□ -2.21
TRAPPC11-210ENST00000513600 Q6ZT83 130 aa1.24□□□□□ -2.21
TRAPPC11-210ENST00000513600 DOLPP1Q86YN1 238 aa1.24□□□□□ -2.21
TRAPPC11-210ENST00000513600 LHFPL5Q8TAF8 219 aa1.24□□□□□ -2.21
TRAPPC11-210ENST00000513600 MITD1Q8WV92 249 aa1.24□□□□□ -2.21
TRAPPC11-210ENST00000513600 MED18Q9BUE0 208 aa1.24□□□□□ -2.21
TRAPPC11-210ENST00000513600 DMAC2Q9NW81 257 aa1.24□□□□□ -2.21
TRAPPC11-210ENST00000513600 BABAM2Q9NXR7 383 aa1.24□□□□□ -2.21
TRAPPC11-210ENST00000513600 H3BSA7 217 aa1.23□□□□□ -2.21
TRAPPC11-210ENST00000513600 GNRH2O43555 120 aa1.23□□□□□ -2.21
TRAPPC11-210ENST00000513600 RCVRNP35243 200 aa1.23□□□□□ -2.21
TRAPPC11-210ENST00000513600 UGT2B10P36537 528 aa1.23□□□□□ -2.21
TRAPPC11-210ENST00000513600 RPL14P50914 215 aaKnown RBP1.23□□□□□ -2.21
TRAPPC11-210ENST00000513600 AQP5P55064 265 aa1.23□□□□□ -2.21
TRAPPC11-210ENST00000513600 FAM201AQ5SY85 155 aa1.23□□□□□ -2.21
TRAPPC11-210ENST00000513600 FAM45AQ8TCE6 357 aa1.23□□□□□ -2.21
TRAPPC11-210ENST00000513600 SNX12Q9UMY4 172 aa1.23□□□□□ -2.21
TRAPPC11-210ENST00000513600 MRPS16Q9Y3D3 137 aaKnown RBP1.23□□□□□ -2.21
TRAPPC11-210ENST00000513600 ZNF638Q14966 1978 aaKnown RBP1.23□□□□□ -2.21
TRAPPC11-210ENST00000513600 C2orf74A8MZ97 194 aa1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 POLR3GO15318 223 aaPredicted RBP1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 CYTH3O43739 400 aa1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 ZNF90Q03938 601 aa1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 CD164Q04900 197 aa1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 VAMP3Q15836 100 aa1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 LRRC28Q86X40 367 aaPredicted RBP1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 ACBD4Q8NC06 268 aa1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 MRAP2Q96G30 205 aa1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 RETNLBQ9BQ08 111 aa1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 BCL7BQ9BQE9 202 aa1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 HINT2Q9BX68 163 aa1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 ZNF471Q9BX82 626 aaPredicted RBP1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 GTSF1LQ9H1H1 148 aa1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 OR51E2Q9H255 320 aa1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 SOX21Q9Y651 276 aaPredicted RBP1.22□□□□□ -2.21
TRAPPC11-210ENST00000513600 GRIFINA4D1Z8 144 aa1.21□□□□□ -2.22
TRAPPC11-210ENST00000513600 TMEM235A6NFC5 223 aa1.21□□□□□ -2.22
TRAPPC11-210ENST00000513600 A8MUN3 132 aa1.21□□□□□ -2.22
TRAPPC11-210ENST00000513600 ZMPSTE24O75844 475 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms