RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 SLC19A3Q9BZV2 496 aa1.32□□□□□ -2.2
LTN1-204ENST00000475344 SMDT1Q9H4I9 107 aa1.32□□□□□ -2.2
LTN1-204ENST00000475344 METTL17Q9H7H0 456 aaPredicted RBP1.32□□□□□ -2.2
LTN1-204ENST00000475344 UBQLN4Q9NRR5 601 aa1.32□□□□□ -2.2
LTN1-204ENST00000475344 TAS2R9Q9NYW1 312 aa1.32□□□□□ -2.2
LTN1-204ENST00000475344 HEY1Q9Y5J3 304 aa1.32□□□□□ -2.2
LTN1-204ENST00000475344 SHANK3Q9BYB0 1731 aa1.32□□□□□ -2.2
LTN1-204ENST00000475344 PTPRKQ15262 1439 aa1.32□□□□□ -2.2
LTN1-204ENST00000475344 ARHGAP32A7KAX9 2087 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 COL18A1P39060 1754 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 NUP153P49790 1475 aaKnown RBP1.31□□□□□ -2.2
LTN1-204ENST00000475344 IGSF23A1L1A6 192 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 KNCNA6PVL3 124 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 ODF3BA8MYP8 253 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 FAM25EA8MYX2 175 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 J3QLI3 93 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 GPR171O14626 319 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 LIN7AO14910 233 aaPredicted RBP1.31□□□□□ -2.2
LTN1-204ENST00000475344 RAB36O95755 333 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 GP1BAP07359 652 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 OR4A8P0C604 315 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 LIMS3P0CW19 117 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 LIMS4P0CW20 117 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 IGHV3-30-3P0DP02 117 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 GABRA3P34903 492 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 MAGEA6P43360 314 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 MAPK14Q16539 360 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 KRTAP21-3Q3LHN1 58 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 PCOTHQ58A44 107 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 EBLN2Q6P2I7 272 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 ANGPTL6Q8NI99 470 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 CXCL16Q9H2A7 254 aa1.31□□□□□ -2.2
LTN1-204ENST00000475344 VWDEQ8N2E2 1590 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 B4DEV8 164 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 F5H5K5 113 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 SULT1C2O00338 296 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 TNFAIP8O95379 198 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 CPMP14384 443 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 SYT1P21579 422 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 GADD45AP24522 165 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 PSMA1P25786 263 aaKnown RBP1.3□□□□□ -2.2
LTN1-204ENST00000475344 GABRA4P48169 554 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 GABARAPL2P60520 117 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 RAB8AP61006 207 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 DYNLL1P63167 89 aaKnown RBP1.3□□□□□ -2.2
LTN1-204ENST00000475344 ZNF117Q03924 483 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 PDK2Q15119 407 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 CENPWQ5EE01 88 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 TTC33Q6PID6 262 aaPredicted RBP1.3□□□□□ -2.2
LTN1-204ENST00000475344 SELENOHQ8IZQ5 122 aaKnown RBP1.3□□□□□ -2.2
LTN1-204ENST00000475344 OR5C1Q8NGR4 320 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 OR51H1Q8NH63 302 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 CCDC12Q8WUD4 166 aaPredicted RBP1.3□□□□□ -2.2
LTN1-204ENST00000475344 TAMM41Q96BW9 452 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 CAPZA3Q96KX2 299 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 C1QTNF6Q9BXI9 259 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 CHST5Q9GZS9 411 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 GTSF1LQ9H1H1 148 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 TREM1Q9NP99 234 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 ALG5Q9Y673 324 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 ATAD5Q96QE3 1844 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 PTPRJQ12913 1337 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 SLIT2O94813 1529 aa1.3□□□□□ -2.2
LTN1-204ENST00000475344 TRPM3Q9HCF6 1732 aaPredicted RBP1.29□□□□□ -2.2
LTN1-204ENST00000475344 DHRS12A0PJE2 317 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 K7EQS6 105 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 M0QYV0 167 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 CRYGDP07320 174 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 ZNF7P17097 686 aaPredicted RBP1.29□□□□□ -2.2
LTN1-204ENST00000475344 HTR4Q13639 388 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 TIMM23BQ5SRD1 257 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 Q6ZRU5 148 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 SLC13A5Q86YT5 568 aaPredicted RBP1.29□□□□□ -2.2
LTN1-204ENST00000475344 OR5AK3PQ8NH89 298 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 ERMNQ8TAM6 284 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 DYNC2LI1Q8TCX1 351 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 TMBIM1Q969X1 311 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 FAM210AQ96ND0 272 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 UPK3BQ9BT76 320 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 MND1Q9BWT6 205 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 TXNL4BQ9NX01 149 aaKnown RBP1.29□□□□□ -2.2
LTN1-204ENST00000475344 LINC00527Q9UJ94 153 aa1.29□□□□□ -2.2
LTN1-204ENST00000475344 A0A1W2PQL4 384 aaPredicted RBP1.28□□□□□ -2.2
LTN1-204ENST00000475344 ERICH4A6NGS2 130 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 P0DMU3 169 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 FAM231AP0DMU4 169 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 FAM231CP0DMU5 169 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 LPAR6P43657 344 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 STC1P52823 247 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 DLX6P56179 175 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 RWDD2BP57060 319 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 SLC35A2P78381 396 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 FOXF1Q12946 379 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 XRCC4Q13426 336 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 CLEC12BQ2HXU8 276 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 MRPL51Q4U2R6 128 aaKnown RBP1.28□□□□□ -2.2
LTN1-204ENST00000475344 C2orf73Q8N5S3 287 aaPredicted RBP1.28□□□□□ -2.2
LTN1-204ENST00000475344 RNASEH2CQ8TDP1 164 aaKnown RBP1.28□□□□□ -2.2
LTN1-204ENST00000475344 LRRC45Q96CN5 670 aa1.28□□□□□ -2.2
LTN1-204ENST00000475344 MBOAT7Q96N66 472 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms