RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 A0A1W2PQU0 124 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 ZNF814B7Z6K7 855 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 F6UZH7 168 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 M0QZ24 198 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 HYPMO75409 117 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 CDAP32320 146 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 MPLP40238 635 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 YPEL3P61236 119 aaPredicted RBP11.07□□□□□ -0.64
PRPF4-201ENST00000374198 TLE3Q04726 772 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 RUNX3Q13761 415 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 MAJINQ3KP22 176 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 PP6455Q8WZ26 134 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 RBM24Q9BX46 236 aaKnown RBP11.07□□□□□ -0.64
PRPF4-201ENST00000374198 HRASLS2Q9NWW9 162 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 A0A1W2PQD3 144 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 CIDEAO60543 219 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 MMP23AO75900 390 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 WNT2P09544 360 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 CD99P14209 185 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 PPP1CAP62136 330 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 LRRC75BQ2VPJ9 315 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 SPIN3Q5JUX0 258 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 VHLLQ6RSH7 139 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 ZNF525Q8N782 197 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 Q8N976 141 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 CORO2AQ92828 525 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 PGAM5Q96HS1 289 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 ZDHHC11Q9H8X9 412 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 SEPSECSQ9HD40 501 aaKnown RBP11.07□□□□□ -0.64
PRPF4-201ENST00000374198 ELOVL5Q9NYP7 299 aa11.07□□□□□ -0.64
PRPF4-201ENST00000374198 A6NCN8 305 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 MLNRO43193 412 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 UCP1P25874 307 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 LHX2P50458 406 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 RPP25LQ8N5L8 163 aaKnown RBP11.06□□□□□ -0.64
PRPF4-201ENST00000374198 SAMD10Q9BYL1 202 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 CSTL1Q9H114 145 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 ZNF703Q9H7S9 590 aaPredicted RBP11.06□□□□□ -0.64
PRPF4-201ENST00000374198 FBXL7Q9UJT9 491 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 DIRC3C9JPN6 131 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 ANGPTL7O43827 346 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 PIAS2O75928 621 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 IGLV3-1P01715 115 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 OPN1LWP04000 364 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 WASP42768 502 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 CARD18P57730 90 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 ADIPOR1Q96A54 375 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 MRPL13Q9BYD1 178 aaKnown RBP11.06□□□□□ -0.64
PRPF4-201ENST00000374198 F5P12259 2224 aa11.06□□□□□ -0.64
PRPF4-201ENST00000374198 SLC31A1O15431 190 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 DHRS3O75911 302 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 CRISP2P16562 243 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 MFAP5Q13361 173 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 FFAR4Q5NUL3 377 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 GATAD1Q8WUU5 269 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 RAB40CQ96S21 281 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 GPHA2Q96T91 129 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 NUDT22Q9BRQ3 303 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 PNO1Q9NRX1 252 aaKnown RBP11.05□□□□□ -0.64
PRPF4-201ENST00000374198 RNF114Q9Y508 228 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 SHANK1Q9Y566 2161 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 TMEM131Q92545 1883 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 IGKV1D-33P01593 117 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 IGKV1-33P01594 117 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 ATXN8OSP0DMR3 200 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 S100A7P31151 101 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 BLKP51451 505 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 KRTDAPP60985 99 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 GRB2P62993 217 aaKnown RBP11.05□□□□□ -0.64
PRPF4-201ENST00000374198 ARL16Q0P5N6 197 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 MYPOPQ86VE0 399 aaPredicted RBP11.05□□□□□ -0.64
PRPF4-201ENST00000374198 DTX1Q86Y01 620 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 TSACCQ96A04 125 aaPredicted RBP11.05□□□□□ -0.64
PRPF4-201ENST00000374198 BET1LQ9NYM9 111 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 ST3GAL6Q9Y274 331 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 PIGLQ9Y2B2 252 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 ZNF318Q5VUA4 2279 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 TMEM238C9JI98 176 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 HMGB3O15347 200 aaKnown RBP11.05□□□□□ -0.64
PRPF4-201ENST00000374198 BMP5P22003 454 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 HINT1P49773 126 aaPredicted RBP11.05□□□□□ -0.64
PRPF4-201ENST00000374198 WDR5BQ86VZ2 330 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 SGMS2Q8NHU3 365 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 PSMF1Q92530 271 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 STARD4Q96DR4 205 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 NEIL1Q96FI4 390 aaPredicted RBP11.05□□□□□ -0.64
PRPF4-201ENST00000374198 SLC7A10Q9NS82 523 aa11.05□□□□□ -0.64
PRPF4-201ENST00000374198 HSBP1L1C9JCN9 74 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 SPRY1O43609 319 aaPredicted RBP11.04□□□□□ -0.64
PRPF4-201ENST00000374198 TIAF1O95411 115 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 CLRN1P58418 232 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 RPS18P62269 152 aaKnown RBP11.04□□□□□ -0.64
PRPF4-201ENST00000374198 RPL19P84098 196 aaKnown RBP11.04□□□□□ -0.64
PRPF4-201ENST00000374198 RNPS1Q15287 305 aaKnown RBP11.04□□□□□ -0.64
PRPF4-201ENST00000374198 C2orf27AQ580R0 203 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 Q6ZPA2 131 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 ZNF818PQ6ZRF7 136 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.04□□□□□ -0.64
PRPF4-201ENST00000374198 BAGE3Q86Y29 109 aa11.04□□□□□ -0.64
PRPF4-201ENST00000374198 BAGE2Q86Y30 109 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms