RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 UQCR10Q9UDW1 63 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 COX11Q9Y6N1 276 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 USP34Q70CQ2 3546 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 ANKUB1A6NFN9 424 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 ESDP10768 282 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 ADMP35318 185 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 CTRLP40313 264 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 LINC00310P59036 64 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 SERF2P84101 59 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 TMEM267Q0VDI3 215 aaPredicted RBP11.1□□□□□ -0.63
PRPF4-201ENST00000374198 TBC1D26Q86UD7 250 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 OR5AU1Q8NGC0 362 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 DYRK2Q92630 601 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 EMC6Q9BV81 110 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 PARD6GQ9BYG4 376 aaPredicted RBP11.1□□□□□ -0.63
PRPF4-201ENST00000374198 VDAC3Q9Y277 283 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 TRIOO75962 3097 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 A0A1W2PP55 124 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 OR6C6A6NF89 314 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 E9PLN8 166 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 H3BP45 60 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 VENTXO95231 258 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 PSMB3P49720 205 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 PPP1CBP62140 327 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 TESK1Q15569 626 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 RD3Q7Z3Z2 195 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 KMT5CQ86Y97 462 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 PIGTQ969N2 578 aa11.1□□□□□ -0.63
PRPF4-201ENST00000374198 A0A0J9YY10 115 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 OTOL1A6NHN0 477 aaPredicted RBP11.09□□□□□ -0.63
PRPF4-201ENST00000374198 C17orf105B2RV13 164 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 UBE2G2P60604 165 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 MSMO1Q15800 293 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 CST6Q15828 149 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 H1FNTQ75WM6 255 aaPredicted RBP11.09□□□□□ -0.63
PRPF4-201ENST00000374198 CCDC74BQ96LY2 380 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 VPS25Q9BRG1 176 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 TUBG2Q9NRH3 451 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 RYDENQ9NUL5 291 aaKnown RBP11.09□□□□□ -0.63
PRPF4-201ENST00000374198 SLC39A9Q9NUM3 307 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 MRPS17Q9Y2R5 130 aaKnown RBP11.09□□□□□ -0.63
PRPF4-201ENST00000374198 SIT1Q9Y3P8 196 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 IGHV2-70DA0A0C4DH43 119 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 A0A1W2PNV4 684 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 C5orf63A6NC05 138 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 NPIPB13A6NJU9 1138 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 NPIPB4C9JG80 1138 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 PPYP01298 95 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 VDAC1P21796 283 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 GNRHRP30968 328 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 HNRNPA3P51991 378 aaKnown RBP11.09□□□□□ -0.63
PRPF4-201ENST00000374198 BIDP55957 195 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 SHBQ15464 509 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 SPATA45Q537H7 98 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 Q6ZVH6 145 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 TMEM105Q8N8V8 129 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 OR4C5Q8NGB2 326 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 OR14C36Q8NHC7 312 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 NAT6Q93015 286 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 PINX1Q96BK5 328 aaKnown RBP11.09□□□□□ -0.63
PRPF4-201ENST00000374198 LYZL4Q96KX0 146 aa11.09□□□□□ -0.63
PRPF4-201ENST00000374198 RER1O15258 196 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 SERF1AO75920 110 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 CLDN17P56750 224 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 RPS21P63220 83 aaKnown RBP11.08□□□□□ -0.64
PRPF4-201ENST00000374198 MORN2Q502X0 79 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 FBLN7Q53RD9 439 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 Q6ZN92 141 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 OR5T1Q8NG75 326 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 OR4F5Q8NH21 305 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 OR4F4Q96R69 305 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 RNF2Q99496 336 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 TXN2Q99757 166 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 TAAR3PQ9P1P4 343 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 BLACEA4D250 179 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 FRG2CA6NGY1 282 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 ALG1L2C9J202 215 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 HS3ST1O14792 307 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 OR2J2O76002 312 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 IGLC2P0DOY2 106 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 IGLC3P0DOY3 106 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 FAHP16930 419 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 IL12BP29460 328 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 SUMO1P63165 101 aaKnown RBP11.08□□□□□ -0.64
PRPF4-201ENST00000374198 FOXL1Q12952 345 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 GAB4Q2WGN9 574 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 BRICD5Q6PL45 260 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 UNQ5815/PRO19632Q6UWF5 114 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 TCF23Q7RTU1 214 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 C20orf196Q8IYI0 205 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 C1orf174Q8IYL3 243 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 ZNF295-AS1Q8N0V1 137 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 OR1E3Q8WZA6 343 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 APH1AQ96BI3 265 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 ZNF160Q9HCG1 818 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 PNRC2Q9NPJ4 139 aaKnown RBP11.08□□□□□ -0.64
PRPF4-201ENST00000374198 KLHL13Q9P2N7 655 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 HSPB7Q9UBY9 170 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 KIAA2026Q5HYC2 2103 aa11.08□□□□□ -0.64
PRPF4-201ENST00000374198 IGHV2OR16-5A0A0B4J2B6 119 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms