RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 RLN1P04808 185 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 ECI1P42126 302 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 GLP1RP43220 463 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 MECP2P51608 486 aaKnown RBP9.79□□□□□ -0.84
CLN6-223ENST00000637823 P2RX3P56373 397 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 EDDM3AQ14507 147 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 IGSF11Q5DX21 431 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 ZNF660Q6AZW8 331 aaPredicted RBP9.79□□□□□ -0.84
CLN6-223ENST00000637823 LYPD2Q6UXB3 125 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 ZNF295-AS1Q8N0V1 137 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 FAM216BQ8N7L0 139 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 ZNF565Q8N9K5 539 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 ZNF2Q9BSG1 426 aaPredicted RBP9.79□□□□□ -0.84
CLN6-223ENST00000637823 CABLES2Q9BTV7 478 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 ALX4Q9H161 411 aaPredicted RBP9.79□□□□□ -0.84
CLN6-223ENST00000637823 TAF9BQ9HBM6 251 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 OR6C3Q9NZP0 311 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 OPN4Q9UHM6 478 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 FLVCR2Q9UPI3 526 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 COL12A1Q99715 3063 aa9.79□□□□□ -0.84
CLN6-223ENST00000637823 TRBV6-7A0A0A0MS04 114 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 A0A1B0GW55 424 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 BET1O15155 118 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 PPIHO43447 177 aaKnown RBP9.78□□□□□ -0.84
CLN6-223ENST00000637823 NDUFB3O43676 98 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 PRAF2O60831 178 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 LY6HO94772 140 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 DUX4L2P0CJ85 424 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 DUX4L3P0CJ86 424 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 DUX4L4P0CJ87 422 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 DUX4L5P0CJ88 424 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 DUX4L6P0CJ89 424 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 DUX4L7P0CJ90 424 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 SELLP14151 372 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 FCGR2CP31995 323 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 BCAP31P51572 246 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 EDDM3BP56851 147 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 RAB25P57735 213 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 MEF2CQ06413 473 aaPredicted RBP9.78□□□□□ -0.84
CLN6-223ENST00000637823 SURF2Q15527 256 aaPredicted RBP9.78□□□□□ -0.84
CLN6-223ENST00000637823 TATDN3Q17R31 274 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 TMEM155Q4W5P6 130 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 LRRC10Q5BKY1 277 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 AADACL3Q5VUY0 350 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 DUX4L9Q6RFH8 374 aaPredicted RBP9.78□□□□□ -0.84
CLN6-223ENST00000637823 C5orf24Q7Z6I8 188 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 OR10J5Q8NHC4 309 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 MARCH1Q8TCQ1 289 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 CORO2AQ92828 525 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 MRGPRFQ96AM1 343 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 CCL19Q99731 98 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 RAB9BQ9NP90 201 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 DUX4Q9UBX2 424 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 SLC25A10Q9UBX3 287 aaPredicted RBP9.78□□□□□ -0.84
CLN6-223ENST00000637823 MIOXQ9UGB7 285 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 GPR132Q9UNW8 380 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 AKAP6Q13023 2319 aa9.78□□□□□ -0.84
CLN6-223ENST00000637823 IGKV1-6A0A0C4DH72 117 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 OR5H14A6NHG9 310 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 C12orf77C9JDV5 145 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 NPIPB11E5RHQ5 1161 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 SPINT2O43291 252 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 IL5P05113 134 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 NDUFB7P17568 137 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 FPR2P25090 351 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 NPY4RP50391 375 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 UCP3P55916 312 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 HERPUD1Q15011 391 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 METTL11BQ5VVY1 283 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 CADM3Q8N126 398 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 TPRX1Q8N7U7 411 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 OR13A1Q8NGR1 328 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 ZFAND1Q8TCF1 268 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 MRGPRDQ8TDS7 321 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 ARL11Q969Q4 196 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 GALMQ96C23 342 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 KIRREL1Q96J84 757 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 TMPRSS13Q9BYE2 586 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 LIME1Q9H400 295 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 LPAR3Q9UBY5 353 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 SLC23A1Q9UHI7 598 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 VSIG4Q9Y279 399 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 ALG5Q9Y673 324 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 TENM4Q6N022 2769 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 FLNBO75369 2602 aaKnown RBP9.77□□□□□ -0.85
CLN6-223ENST00000637823 UNC79Q9P2D8 2635 aa9.77□□□□□ -0.85
CLN6-223ENST00000637823 USP9YO00507 2555 aaPredicted RBP9.76□□□□□ -0.85
CLN6-223ENST00000637823 MAST4O15021 2626 aa9.76□□□□□ -0.85
CLN6-223ENST00000637823 TRGV10A0A0A0MS01 117 aa9.76□□□□□ -0.85
CLN6-223ENST00000637823 A0A0B4J293 547 aa9.76□□□□□ -0.85
CLN6-223ENST00000637823 hADV38S2A0JD32 116 aa9.76□□□□□ -0.85
CLN6-223ENST00000637823 C7orf66A4D0T2 115 aa9.76□□□□□ -0.85
CLN6-223ENST00000637823 FAM172BPA6NC97 362 aa9.76□□□□□ -0.85
CLN6-223ENST00000637823 DVL1O14640 695 aa9.76□□□□□ -0.85
CLN6-223ENST00000637823 NDUFS7O75251 213 aa9.76□□□□□ -0.85
CLN6-223ENST00000637823 TUSC2O75896 110 aa9.76□□□□□ -0.85
CLN6-223ENST00000637823 PPYP01298 95 aa9.76□□□□□ -0.85
CLN6-223ENST00000637823 HBZP02008 142 aa9.76□□□□□ -0.85
CLN6-223ENST00000637823 HEXAP06865 529 aa9.76□□□□□ -0.85
CLN6-223ENST00000637823 ZNF728P0DKX0 622 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms