RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 MRPL32Q9BYC8 188 aaKnown RBP1.44□□□□□ -2.18
TRAPPC11-210ENST00000513600 OTOFQ9HC10 1997 aa1.43□□□□□ -2.18
TRAPPC11-210ENST00000513600 RGS12O14924 1447 aa1.43□□□□□ -2.18
TRAPPC11-210ENST00000513600 MUC21A0A0G2JKD1 596 aa1.43□□□□□ -2.18
TRAPPC11-210ENST00000513600 MUC21A0A140T8X8 626 aa1.43□□□□□ -2.18
TRAPPC11-210ENST00000513600 RNASEK-C17orf49H0YIS7 233 aa1.43□□□□□ -2.18
TRAPPC11-210ENST00000513600 K7EQS6 105 aa1.43□□□□□ -2.18
TRAPPC11-210ENST00000513600 GIMD1P0DJR0 217 aa1.43□□□□□ -2.18
TRAPPC11-210ENST00000513600 HSPA13P48723 471 aa1.43□□□□□ -2.18
TRAPPC11-210ENST00000513600 ZNF117Q03924 483 aa1.43□□□□□ -2.18
TRAPPC11-210ENST00000513600 OR6K2Q8NGY2 324 aa1.43□□□□□ -2.18
TRAPPC11-210ENST00000513600 ZNRF2Q8NHG8 242 aa1.43□□□□□ -2.18
TRAPPC11-210ENST00000513600 GTF2H4Q92759 462 aa1.43□□□□□ -2.18
TRAPPC11-210ENST00000513600 MAP1LC3CQ9BXW4 147 aa1.43□□□□□ -2.18
TRAPPC11-210ENST00000513600 USP42Q9H9J4 1324 aaKnown RBP1.42□□□□□ -2.18
TRAPPC11-210ENST00000513600 LCTP09848 1927 aa1.42□□□□□ -2.18
TRAPPC11-210ENST00000513600 RFXANKO14593 260 aa1.42□□□□□ -2.18
TRAPPC11-210ENST00000513600 GTF2H1P32780 548 aa1.42□□□□□ -2.18
TRAPPC11-210ENST00000513600 RANBP1P43487 201 aa1.42□□□□□ -2.18
TRAPPC11-210ENST00000513600 LPAR6P43657 344 aa1.42□□□□□ -2.18
TRAPPC11-210ENST00000513600 RAB2AP61019 212 aa1.42□□□□□ -2.18
TRAPPC11-210ENST00000513600 SDIM1Q6ZPB5 146 aa1.42□□□□□ -2.18
TRAPPC11-210ENST00000513600 DGAT2L6Q6ZPD8 337 aa1.42□□□□□ -2.18
TRAPPC11-210ENST00000513600 CLEC20AQ6ZU45 233 aa1.42□□□□□ -2.18
TRAPPC11-210ENST00000513600 ZMYND19Q96E35 227 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC11-210ENST00000513600 TXNL4BQ9NX01 149 aaKnown RBP1.42□□□□□ -2.18
TRAPPC11-210ENST00000513600 TBL2Q9Y4P3 447 aaKnown RBP1.42□□□□□ -2.18
TRAPPC11-210ENST00000513600 LYNX1P0DP58 116 aa1.41□□□□□ -2.18
TRAPPC11-210ENST00000513600 SPNP16150 400 aa1.41□□□□□ -2.18
TRAPPC11-210ENST00000513600 CD36P16671 472 aa1.41□□□□□ -2.18
TRAPPC11-210ENST00000513600 ALOX5APP20292 161 aa1.41□□□□□ -2.18
TRAPPC11-210ENST00000513600 PRDX1Q06830 199 aaKnown RBP1.41□□□□□ -2.18
TRAPPC11-210ENST00000513600 STK38Q15208 465 aa1.41□□□□□ -2.18
TRAPPC11-210ENST00000513600 FAM19A3Q7Z5A8 133 aa1.41□□□□□ -2.18
TRAPPC11-210ENST00000513600 PDCL2Q8N4E4 241 aa1.41□□□□□ -2.18
TRAPPC11-210ENST00000513600 CIB1Q99828 191 aa1.41□□□□□ -2.18
TRAPPC11-210ENST00000513600 TAPBPLQ9BX59 468 aa1.41□□□□□ -2.18
TRAPPC11-210ENST00000513600 GAL3ST2Q9H3Q3 398 aa1.41□□□□□ -2.18
TRAPPC11-210ENST00000513600 RPRD1BQ9NQG5 326 aaKnown RBP1.41□□□□□ -2.18
TRAPPC11-210ENST00000513600 MPDZO75970 2070 aa1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 TRGV2A0A075B6R0 118 aa1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 DENRO43583 198 aaKnown RBP1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 HMMRO75330 724 aa1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 SOD1P00441 154 aa1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 TPM2P07951 284 aa1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 HINT1P49773 126 aaPredicted RBP1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 DEFA6Q01524 100 aa1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 ACTL10Q5JWF8 245 aa1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 ZFAND2AQ8N6M9 145 aa1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 OR4K17Q8NGC6 315 aa1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 OR4X2Q8NGF9 303 aa1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 FBXL15Q9H469 300 aa1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 HAUS4Q9H6D7 363 aa1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 AK9Q5TCS8 1911 aa1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 TRPM3Q9HCF6 1732 aaPredicted RBP1.4□□□□□ -2.19
TRAPPC11-210ENST00000513600 ADAMTSL3P82987 1691 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 IGLV3-9A0A075B6K5 115 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 TRAV8-2A0A0B4J237 113 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 IGKV1-12A0A0C4DH73 117 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 IGKV1D-12P01611 117 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 MP68P56378 58 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 C6orf183Q5T699 404 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 HBMQ6B0K9 141 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 FAM19A1Q7Z5A9 133 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 TOP1MTQ969P6 601 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 MRPS24Q96EL2 167 aaKnown RBP1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 MBOAT7Q96N66 472 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 HSPB9Q9BQS6 159 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 SPZ1Q9BXG8 430 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 TM6SF2Q9BZW4 377 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 SYT4Q9H2B2 425 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 CRLF2Q9HC73 371 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 DDX18Q9NVP1 670 aaKnown RBP1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 NDUFB11Q9NX14 153 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 RTEL1-TNFRSF6BF6WH68 1400 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 COL18A1P39060 1754 aa1.39□□□□□ -2.19
TRAPPC11-210ENST00000513600 FAM183AA6NL82 134 aa1.38□□□□□ -2.19
TRAPPC11-210ENST00000513600 FGF16O43320 207 aa1.38□□□□□ -2.19
TRAPPC11-210ENST00000513600 NAPSAO96009 420 aa1.38□□□□□ -2.19
TRAPPC11-210ENST00000513600 LTAP01374 205 aa1.38□□□□□ -2.19
TRAPPC11-210ENST00000513600 INPP1P49441 399 aa1.38□□□□□ -2.19
TRAPPC11-210ENST00000513600 AKR1C2P52895 323 aa1.38□□□□□ -2.19
TRAPPC11-210ENST00000513600 KRTAP10-4P60372 401 aaPredicted RBP1.38□□□□□ -2.19
TRAPPC11-210ENST00000513600 C10orf126Q8N4M7 172 aa1.38□□□□□ -2.19
TRAPPC11-210ENST00000513600 SPICQ8N5J4 248 aa1.38□□□□□ -2.19
TRAPPC11-210ENST00000513600 TMBIM1Q969X1 311 aa1.38□□□□□ -2.19
TRAPPC11-210ENST00000513600 NAA38Q9BRA0 125 aaKnown RBP1.38□□□□□ -2.19
TRAPPC11-210ENST00000513600 ATG2BQ96BY7 2078 aa1.37□□□□□ -2.19
TRAPPC11-210ENST00000513600 GOLGA6L7A0A1B0GV03 622 aa1.37□□□□□ -2.19
TRAPPC11-210ENST00000513600 TMEM250H0YL14 139 aa1.37□□□□□ -2.19
TRAPPC11-210ENST00000513600 UBDO15205 165 aa1.37□□□□□ -2.19
TRAPPC11-210ENST00000513600 KDELR3O43731 214 aa1.37□□□□□ -2.19
TRAPPC11-210ENST00000513600 PEBP1P30086 187 aaKnown RBP1.37□□□□□ -2.19
TRAPPC11-210ENST00000513600 CD200P41217 278 aa1.37□□□□□ -2.19
TRAPPC11-210ENST00000513600 BAXQ07812 192 aa1.37□□□□□ -2.19
TRAPPC11-210ENST00000513600 TRIP13Q15645 432 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC11-210ENST00000513600 FAHD1Q6P587 224 aa1.37□□□□□ -2.19
TRAPPC11-210ENST00000513600 C16orf78Q8WTQ4 265 aa1.37□□□□□ -2.19
TRAPPC11-210ENST00000513600 EBNA1BP2Q99848 306 aaKnown RBP1.37□□□□□ -2.19
TRAPPC11-210ENST00000513600 PSMD13Q9UNM6 376 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms