RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SIGLEC12Q96PQ1 595 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 HCRTR1O43613 425 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 DTYMKP23919 212 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 EPHA8P29322 1005 aaPredicted RBP11.14□□□□□ -0.63
PRPF4-201ENST00000374198 NPBWR2P48146 333 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 DAP3P51398 398 aaKnown RBP11.14□□□□□ -0.63
PRPF4-201ENST00000374198 WDYHV1Q96HA8 205 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 LRRC3BQ96PB8 259 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 NXF5Q9H1B4 397 aaKnown RBP11.14□□□□□ -0.63
PRPF4-201ENST00000374198 PARLQ9H300 379 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 ZNF286AQ9HBT8 521 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 FAM60AQ9NP50 221 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 PGCP20142 388 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 PAX9P55771 341 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 Q96M66 194 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 TMEM56Q96MV1 263 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 MED29Q9NX70 200 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 SLC45A2Q9UMX9 530 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 PTRH2Q9Y3E5 179 aaKnown RBP11.13□□□□□ -0.63
PRPF4-201ENST00000374198 WIPI2Q9Y4P8 454 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 TMEM56-RWDD3S4R434 201 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 TMEM250H0YL14 139 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 SYNGR4O95473 234 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 CTSBP07858 339 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 FCGR2AP12318 317 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 AADACP22760 399 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 EIF3IQ13347 325 aaKnown RBP11.13□□□□□ -0.63
PRPF4-201ENST00000374198 UEVLDQ8IX04 471 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 PRR22Q8IZ63 422 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 SELENOHQ8IZQ5 122 aaKnown RBP11.13□□□□□ -0.63
PRPF4-201ENST00000374198 GCNT2Q8N0V5 402 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 SCGB1C1Q8TD33 95 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 HSPB9Q9BQS6 159 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 ZNF552Q9H707 407 aaPredicted RBP11.13□□□□□ -0.63
PRPF4-201ENST00000374198 SERGEFQ9UGK8 458 aa11.13□□□□□ -0.63
PRPF4-201ENST00000374198 UBE2J1Q9Y385 318 aaPredicted RBP11.13□□□□□ -0.63
PRPF4-201ENST00000374198 CHTOPQ9Y3Y2 248 aaKnown RBP11.13□□□□□ -0.63
PRPF4-201ENST00000374198 A0A0U1RQK1 487 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 DUXBA0A1W2PPF3 345 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 ZNF320A2RRD8 509 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 CBR3O75828 277 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 NXPH3O95157 252 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 GYPAP02724 150 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 MDH2P40926 338 aaKnown RBP11.12□□□□□ -0.63
PRPF4-201ENST00000374198 LIN37Q96GY3 246 aaPredicted RBP11.12□□□□□ -0.63
PRPF4-201ENST00000374198 APOOQ9BUR5 198 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 OBP2AQ9NY56 170 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 PLA2G3Q9NZ20 509 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 LHFPL6Q9Y693 200 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 CLEC18AA5D8T8 446 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 COL9A1P20849 921 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 OR1D4P47884 311 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 COMPP49747 757 aaPredicted RBP11.12□□□□□ -0.63
PRPF4-201ENST00000374198 FAM78BQ5VT40 261 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 LINC01551Q86U37 167 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 CLEC18CQ8NCF0 446 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 OR4B1Q8NGF8 309 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 KCNE4Q8WWG9 221 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 DDIT4LQ96D03 193 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 DEC1Q9P2X7 70 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 LAMTOR2Q9Y2Q5 125 aa11.12□□□□□ -0.63
PRPF4-201ENST00000374198 ZDBF2Q9HCK1 2354 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 PRSS38A1L453 326 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 GALR2O43603 387 aaPredicted RBP11.11□□□□□ -0.63
PRPF4-201ENST00000374198 HERV-K104P61576 105 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 POU3F1Q03052 451 aaPredicted RBP11.11□□□□□ -0.63
PRPF4-201ENST00000374198 SLC24A4Q8NFF2 622 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 NUDT10Q8NFP7 164 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 MRPL30Q8TCC3 161 aaKnown RBP11.11□□□□□ -0.63
PRPF4-201ENST00000374198 BTF3L4Q96K17 158 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 PSMG3Q9BT73 122 aaPredicted RBP11.11□□□□□ -0.63
PRPF4-201ENST00000374198 POLR1DQ9Y2S0 133 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 CACNA1IQ9P0X4 2223 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 CBY3A6NI87 242 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 TNFRSF10CO14798 259 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 IGHEP01854 428 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 ZP4Q12836 540 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 PRTGQ2VWP7 1150 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 ZNF321PQ8N8H1 164 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 OR2D3Q8NGH3 330 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 SVIPQ8NHG7 77 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 CCL4L1Q8NHW4 92 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 WWTR1Q9GZV5 400 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 PATZ1Q9HBE1 687 aaKnown RBP11.11□□□□□ -0.63
PRPF4-201ENST00000374198 TP53TG3Q9ULZ0 132 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 MUC22E2RYF6 1773 aaPredicted RBP11.11□□□□□ -0.63
PRPF4-201ENST00000374198 PHF3Q92576 2039 aaKnown RBP11.11□□□□□ -0.63
PRPF4-201ENST00000374198 GRIFINA4D1Z8 144 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 H0YIG0 161 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 CTSEP14091 401 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 TLE1Q04724 770 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 DEFB110Q30KQ9 67 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 NMSQ5H8A3 153 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 CLEC2AQ6UVW9 174 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 FAM180AQ6UWF9 173 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 TMEM144Q7Z5S9 345 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 ZNF709Q8N972 641 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 ZNF738Q8NE65 137 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 IFI44Q8TCB0 444 aa11.11□□□□□ -0.63
PRPF4-201ENST00000374198 LHX4Q969G2 390 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms