RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823		Q6ZPA2	131 aa		9.83	□□□□□ -0.84
CLN6-223	ENST00000637823	ZNF788	Q6ZQV5	615 aa		9.83	□□□□□ -0.84
CLN6-223	ENST00000637823	PEG10	Q86TG7	708 aa	Known RBP	9.83	□□□□□ -0.84
CLN6-223	ENST00000637823	GLCCI1	Q86VQ1	547 aa		9.83	□□□□□ -0.84
CLN6-223	ENST00000637823	GAFA1	Q96PS6	74 aa		9.83	□□□□□ -0.84
CLN6-223	ENST00000637823	SLC25A21	Q9BQT8	299 aa	Predicted RBP	9.83	□□□□□ -0.84
CLN6-223	ENST00000637823	FAM234A	Q9H0X4	552 aa		9.83	□□□□□ -0.84
CLN6-223	ENST00000637823	CLEC4M	Q9H2X3	399 aa	Predicted RBP	9.83	□□□□□ -0.84
CLN6-223	ENST00000637823	NCOR1P1	Q9H4R4	102 aa		9.83	□□□□□ -0.84
CLN6-223	ENST00000637823	EHF	Q9NZC4	300 aa		9.83	□□□□□ -0.84
CLN6-223	ENST00000637823	MAB21L2	Q9Y586	359 aa		9.83	□□□□□ -0.84
CLN6-223	ENST00000637823		A1L4Q6	167 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	FUOM	A2VDF0	154 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	NKX6-3	A6NJ46	265 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	INMT-MINDY4	F8WBC2	141 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	OVOL3	O00110	214 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	SIGLEC5	O15389	551 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	F12	P00748	615 aa	Predicted RBP	9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	TK1	P04183	234 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	CTXN2	P0C2S0	81 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	GSTT2	P0CG29	244 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	DAO	P14920	347 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	IL13RA1	P78552	427 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	AES	Q08117	197 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	KRBOX4	Q5JUW0	171 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	DHRS11	Q6UWP2	260 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	IDO2	Q6ZQW0	420 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	SLC36A1	Q7Z2H8	476 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	ZNRF1	Q8ND25	227 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	OR4A4P	Q8NGN8	299 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	TERB2	Q8NHR7	220 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	CCDC107	Q8WV48	283 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	COQ2	Q96H96	371 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	CCL13	Q99616	98 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	MBNL3	Q9NUK0	354 aa	Known RBP	9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	NUDT15	Q9NV35	164 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	ING3	Q9NXR8	418 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	KCNIP1	Q9NZI2	227 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	KIF25	Q9UIL4	384 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	TRAPPC2L	Q9UL33	140 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	UTP20	O75691	2785 aa	Known RBP	9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	DCHS2	Q6V1P9	2916 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	LRRK2	Q5S007	2527 aa		9.82	□□□□□ -0.84
CLN6-223	ENST00000637823	TRAV6	A0A075B6T7	132 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	LYNX1	G3V0Z9	82 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	SDCBP	O00560	298 aa	Predicted RBP	9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	FABP7	O15540	132 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	RP2	O75695	350 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	DHFR	P00374	187 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	OR5H8	P0DN80	308 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	LYNX1	P0DP58	116 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	RCC1	P18754	421 aa	Predicted RBP	9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	ERP29	P30040	261 aa	Known RBP	9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	GLIPR1	P48060	266 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	EFNA4	P52798	201 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	TMEM33	P57088	247 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	SCGB2B2	Q4G0G5	96 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	TRAT1	Q6PIZ9	186 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	OR6F1	Q8NGZ6	308 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	IGFBPL1	Q8WX77	278 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	RAB1C	Q92928	201 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	UPRT	Q96BW1	309 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	LURAP1	Q96LR2	239 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	TMEM246	Q9BRR3	403 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	GINS4	Q9BRT9	223 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	C20orf85	Q9H1P6	137 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	KAAG1	Q9UBP8	84 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	PCDHB10	Q9UN67	800 aa		9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	YLPM1	P49750	1951 aa	Known RBP	9.81	□□□□□ -0.84
CLN6-223	ENST00000637823	hCG_2014768	A0A024R1R8	64 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	MEIKIN	A0A087WXM9	373 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	IGHV2-70	P01814	119 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	SCT	P09683	121 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	GZMH	P20718	246 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	CDKN1A	P38936	164 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	SEC61A1	P61619	476 aa	Known RBP	9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	HLA-DRB3	P79483	266 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	HMGN3	Q15651	99 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	CR1L	Q2VPA4	569 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	C6orf183	Q5T699	404 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	ZNF554	Q86TJ5	538 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	LHFPL1	Q86WI0	220 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	MUC20	Q8N307	709 aa	Predicted RBP	9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	ZDHHC22	Q8N966	263 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	TMEM185A	Q8NFB2	350 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	OR13C8	Q8NGS7	320 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	GIMAP1	Q8WWP7	306 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	C14orf79	Q96F83	325 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	TIMD4	Q96H15	378 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	SCGB3A2	Q96PL1	93 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	CHODL	Q9H9P2	273 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	USF3	Q68DE3	2245 aa		9.8	□□□□□ -0.84
CLN6-223	ENST00000637823	TRAV39	A0A0B4J263	110 aa		9.79	□□□□□ -0.84
CLN6-223	ENST00000637823	ODAM	A1E959	279 aa		9.79	□□□□□ -0.84
CLN6-223	ENST00000637823	CEACAM18	A8MTB9	384 aa		9.79	□□□□□ -0.84
CLN6-223	ENST00000637823	ARPC1B	O15143	372 aa	Known RBP	9.79	□□□□□ -0.84
CLN6-223	ENST00000637823	TMPRSS2	O15393	492 aa		9.79	□□□□□ -0.84
CLN6-223	ENST00000637823	ADAM20	O43506	726 aa		9.79	□□□□□ -0.84
CLN6-223	ENST00000637823	PEX14	O75381	377 aa		9.79	□□□□□ -0.84
CLN6-223	ENST00000637823	DIRAS3	O95661	229 aa		9.79	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms