RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 OR2B6P58173 313 aa1.5□□□□□ -2.17
TRAPPC11-210ENST00000513600 DOC2AQ14183 400 aa1.5□□□□□ -2.17
TRAPPC11-210ENST00000513600 HSP90AA4PQ58FG1 418 aa1.5□□□□□ -2.17
TRAPPC11-210ENST00000513600 N4BP2L1Q5TBK1 243 aaPredicted RBP1.5□□□□□ -2.17
TRAPPC11-210ENST00000513600 SLC25A45Q8N413 288 aa1.5□□□□□ -2.17
TRAPPC11-210ENST00000513600 GATD1Q8NB37 220 aa1.5□□□□□ -2.17
TRAPPC11-210ENST00000513600 OR52K2Q8NGK3 314 aa1.5□□□□□ -2.17
TRAPPC11-210ENST00000513600 MINOS1-NBL1R4GNA1 71 aa1.5□□□□□ -2.17
TRAPPC11-210ENST00000513600 IGHV2-26A0A0B4J1V2 119 aa1.49□□□□□ -2.17
TRAPPC11-210ENST00000513600 PRMT5O14744 637 aaPredicted RBP1.49□□□□□ -2.17
TRAPPC11-210ENST00000513600 TCF21O43680 179 aa1.49□□□□□ -2.17
TRAPPC11-210ENST00000513600 MBP02144 154 aa1.49□□□□□ -2.17
TRAPPC11-210ENST00000513600 GPX1P07203 203 aa1.49□□□□□ -2.17
TRAPPC11-210ENST00000513600 CBX5P45973 191 aa1.49□□□□□ -2.17
TRAPPC11-210ENST00000513600 ANKHQ9HCJ1 492 aa1.49□□□□□ -2.17
TRAPPC11-210ENST00000513600 FLG2Q5D862 2391 aaPredicted RBP1.49□□□□□ -2.17
TRAPPC11-210ENST00000513600 COL4A2P08572 1712 aa1.49□□□□□ -2.17
TRAPPC11-210ENST00000513600 TTC41PQ6P2S7 1318 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 VPS37CA5D8V6 355 aaPredicted RBP1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 SLC2A1P11166 492 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 ZNF3P17036 446 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 SRMP19623 302 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 GCLMP48507 274 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 TTPAP49638 278 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 SPAG1Q07617 926 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 HTR4Q13639 388 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 OR8G1Q15617 311 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 CCDC121Q6ZUS5 278 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 OLIG3Q7RTU3 272 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 ZNF563Q8TA94 476 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 FBXL3Q9UKT7 428 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 AMMECR1Q9Y4X0 333 aaPredicted RBP1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 COL4A1P02462 1669 aa1.48□□□□□ -2.17
TRAPPC11-210ENST00000513600 IGKV1D-43A0A0B4J1Z2 117 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 CASC3O15234 703 aaKnown RBP1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 SOX14O95416 240 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 CA2P00918 260 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 IGKV5-2P06315 115 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 CRYGDP07320 174 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 CPN2P22792 545 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 GUSBP1Q15486 140 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 SSX7Q7RTT5 188 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 OR8G5Q8NG78 346 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 OR4X1Q8NH49 305 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 ERMNQ8TAM6 284 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 CLDN23Q96B33 292 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 ZNF396Q96N95 335 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 POTEKPQ9BYX7 375 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 ALX4Q9H161 411 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 VAPAQ9P0L0 249 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 WASHC3Q9Y3C0 194 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 HEY1Q9Y5J3 304 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 PXDNLA1KZ92 1463 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 ATRNO75882 1429 aa1.47□□□□□ -2.17
TRAPPC11-210ENST00000513600 CD8AP01732 235 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 PYCR1P32322 319 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 RAB38P57729 211 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 DSTNP60981 165 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 ASCL4Q6XD76 172 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 FAM184AQ8NB25 1140 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 OR4A15Q8NGL6 344 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 OR6N2Q8NGY6 317 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 CDKL2Q92772 493 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 BIRC8Q96P09 236 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 COPS4Q9BT78 406 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 FBXO44Q9H4M3 255 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 VCX3AQ9NNX9 186 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 CRB1P82279 1406 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 CEP170Q5SW79 1584 aa1.46□□□□□ -2.18
TRAPPC11-210ENST00000513600 SLIT2O94813 1529 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 LAMB2P55268 1798 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 H0YIV9 168 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 GMDSO60547 372 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 OR4A8P0C604 315 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 PRKACAP17612 351 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 GABRA3P34903 492 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 SPAM1P38567 509 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 RWDD2BP57060 319 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 RHOAP61586 193 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 HBG1P69891 147 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 HBG2P69892 147 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 ZIC4Q8N9L1 334 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 CACNG8Q8WXS5 425 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 PITX2Q99697 317 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 PSME2Q9UL46 239 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 CR1P17927 2039 aa1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 RP1L1Q8IWN7 2480 aaPredicted RBP1.45□□□□□ -2.18
TRAPPC11-210ENST00000513600 IGHV3OR15-7A0A075B7D8 119 aa1.44□□□□□ -2.18
TRAPPC11-210ENST00000513600 A0A0G2JQZ4 141 aa1.44□□□□□ -2.18
TRAPPC11-210ENST00000513600 A0A1W2PPV4 95 aa1.44□□□□□ -2.18
TRAPPC11-210ENST00000513600 I3L4J1 428 aa1.44□□□□□ -2.18
TRAPPC11-210ENST00000513600 PDCD6O75340 191 aa1.44□□□□□ -2.18
TRAPPC11-210ENST00000513600 NQO1P15559 274 aaKnown RBP1.44□□□□□ -2.18
TRAPPC11-210ENST00000513600 DEKP35659 375 aaKnown RBP1.44□□□□□ -2.18
TRAPPC11-210ENST00000513600 FAM229BQ4G0N7 80 aa1.44□□□□□ -2.18
TRAPPC11-210ENST00000513600 VN1R4Q7Z5H5 301 aa1.44□□□□□ -2.18
TRAPPC11-210ENST00000513600 CD200R1Q8TD46 325 aa1.44□□□□□ -2.18
TRAPPC11-210ENST00000513600 GLT1D1Q96MS3 346 aa1.44□□□□□ -2.18
TRAPPC11-210ENST00000513600 GPR22Q99680 433 aa1.44□□□□□ -2.18
TRAPPC11-210ENST00000513600 SUCNR1Q9BXA5 334 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms