RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 UGT2B10P36537 528 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 KCNJ3P48549 501 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 PLTPP55058 493 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 CD164Q04900 197 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 TRAM1Q15629 374 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 TRIP13Q15645 432 aaPredicted RBP1.43□□□□□ -2.18
LTN1-204ENST00000475344 CST6Q15828 149 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 MRPL52Q86TS9 123 aaKnown RBP1.43□□□□□ -2.18
LTN1-204ENST00000475344 C10orf107Q8IVU9 208 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 HS3ST5Q8IZT8 346 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 TRIML2Q8N7C3 387 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 OR2Y1Q8NGV0 311 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 GTF2H4Q92759 462 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 MAL2Q969L2 176 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 C20orf166-AS1Q96NR2 134 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 LINC01587Q99440 93 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 XKR8Q9H6D3 395 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 CLEC2DQ9UHP7 191 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 ARAP3Q8WWN8 1544 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 TRAV8-2A0A0B4J237 113 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 A6NED7 52 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 H3BP45 60 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 FABP7O15540 132 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 CST4P01036 141 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 GYPCP04921 128 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 CCL2P13500 99 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 CBR1P16152 277 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 INPP1P49441 399 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 RAB25P57735 213 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 TNNC1P63316 161 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 PRDX1Q06830 199 aaKnown RBP1.42□□□□□ -2.18
LTN1-204ENST00000475344 BSXQ3C1V8 233 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 SPIN4Q56A73 249 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 OLIG3Q7RTU3 272 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 MARCH3Q86UD3 253 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 REEP6Q96HR9 211 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 CPB2Q96IY4 423 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 OR8B2Q96RD0 313 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 SIKE1Q9BRV8 207 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 MFSD1Q9H3U5 465 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 HAUS4Q9H6D7 363 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 MAT2BQ9NZL9 334 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 RPUSD1Q9UJJ7 312 aaKnown RBP1.42□□□□□ -2.18
LTN1-204ENST00000475344 POMPQ9Y244 141 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 TRPM6Q9BX84 2022 aa1.42□□□□□ -2.18
LTN1-204ENST00000475344 USP42Q9H9J4 1324 aaKnown RBP1.41□□□□□ -2.18
LTN1-204ENST00000475344 ZNF638Q14966 1978 aaKnown RBP1.41□□□□□ -2.18
LTN1-204ENST00000475344 ATG2BQ96BY7 2078 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 MYO9BQ13459 2157 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 F8VP50 259 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 DENRO43583 198 aaKnown RBP1.41□□□□□ -2.18
LTN1-204ENST00000475344 SHOX2O60902 331 aaPredicted RBP1.41□□□□□ -2.18
LTN1-204ENST00000475344 AKR1C4P17516 323 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 LCN1P31025 176 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 RHOAP61586 193 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 FBXO48Q5FWF7 155 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 C10orf91Q5T1B1 145 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 LAIR2Q6ISS4 152 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 DGAT2L6Q6ZPD8 337 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 CLEC20AQ6ZU45 233 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 KRTCAP2Q8N6L1 136 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 OR2AE1Q8NHA4 323 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 FAM45AQ8TCE6 357 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 KCTD4Q8WVF5 259 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 IFT81Q8WYA0 676 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 CCDC124Q96CT7 223 aaKnown RBP1.41□□□□□ -2.18
LTN1-204ENST00000475344 C19orf60Q96EN9 201 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 EBPLQ9BY08 206 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 BCL2L14Q9BZR8 327 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 ARL6Q9H0F7 186 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 MRPL16Q9NX20 251 aaKnown RBP1.41□□□□□ -2.18
LTN1-204ENST00000475344 VPREB3Q9UKI3 123 aa1.41□□□□□ -2.18
LTN1-204ENST00000475344 NXT1Q9UKK6 140 aaKnown RBP1.41□□□□□ -2.18
LTN1-204ENST00000475344 HELZ2Q9BYK8 2649 aaKnown RBP1.41□□□□□ -2.18
LTN1-204ENST00000475344 LCTP09848 1927 aa1.4□□□□□ -2.18
LTN1-204ENST00000475344 CEP170Q5SW79 1584 aa1.4□□□□□ -2.19
LTN1-204ENST00000475344 A0A1B0GW15 77 aa1.4□□□□□ -2.19
LTN1-204ENST00000475344 FADS2O95864 444 aaKnown RBP1.4□□□□□ -2.19
LTN1-204ENST00000475344 IGKV5-2P06315 115 aa1.4□□□□□ -2.19
LTN1-204ENST00000475344 HSPA13P48723 471 aa1.4□□□□□ -2.19
LTN1-204ENST00000475344 AADACL4Q5VUY2 407 aa1.4□□□□□ -2.19
LTN1-204ENST00000475344 ZNF322Q6U7Q0 402 aaPredicted RBP1.4□□□□□ -2.19
LTN1-204ENST00000475344 CDRT4Q8N9R6 151 aa1.4□□□□□ -2.19
LTN1-204ENST00000475344 HIST1H2BAQ96A08 127 aa1.4□□□□□ -2.19
LTN1-204ENST00000475344 AGPAT3Q9NRZ7 376 aa1.4□□□□□ -2.19
LTN1-204ENST00000475344 STK38LQ9Y2H1 464 aa1.4□□□□□ -2.19
LTN1-204ENST00000475344 LINC00588Q9Y4M8 146 aa1.4□□□□□ -2.19
LTN1-204ENST00000475344 LOC100506127A0A0U1RQW1 187 aa1.39□□□□□ -2.19
LTN1-204ENST00000475344 ARGFXA6NJG6 315 aa1.39□□□□□ -2.19
LTN1-204ENST00000475344 TP53I11O14683 189 aa1.39□□□□□ -2.19
LTN1-204ENST00000475344 LECT2O14960 151 aa1.39□□□□□ -2.19
LTN1-204ENST00000475344 SPNP16150 400 aa1.39□□□□□ -2.19
LTN1-204ENST00000475344 ZNF22P17026 224 aaPredicted RBP1.39□□□□□ -2.19
LTN1-204ENST00000475344 MAGEA3P43357 314 aa1.39□□□□□ -2.19
LTN1-204ENST00000475344 UBE2KP61086 200 aa1.39□□□□□ -2.19
LTN1-204ENST00000475344 PAFAH1B3Q15102 231 aaKnown RBP1.39□□□□□ -2.19
LTN1-204ENST00000475344 Q3ZCU0 254 aa1.39□□□□□ -2.19
LTN1-204ENST00000475344 ELP2Q6IA86 826 aa1.39□□□□□ -2.19
LTN1-204ENST00000475344 SSX7Q7RTT5 188 aa1.39□□□□□ -2.19
LTN1-204ENST00000475344 LRRC6Q86X45 466 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms