RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 C17orf51A8MQB3 221 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 NPIPB7O75200 414 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 TECTAO75443 2155 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 IFNA1P01562 189 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 HLA-HP01893 362 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 GCH1P30793 250 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 RPL15P61313 204 aaKnown RBP11.17□□□□□ -0.62
PRPF4-201ENST00000374198 SFTPA1Q8IWL2 248 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 YAF2Q8IY57 180 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 CPAMD8Q8IZJ3 1885 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 ASB10Q8WXI3 467 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 ABHD14BQ96IU4 210 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 PLA2G2FQ9BZM2 168 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 ZNF319Q9P2F9 582 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 RNF115Q9Y4L5 304 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 SEMA4FO95754 770 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 NUDT14O95848 222 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 OPRM1P35372 400 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 EXT1Q16394 746 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 LYG1Q8N1E2 194 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 CCDC71LQ8N9Z2 235 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 MRGPRDQ8TDS7 321 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 KCNK17Q96T54 332 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 SPIN2AQ99865 258 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 SPIN2BQ9BPZ2 258 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 CCDC3Q9BQI4 270 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 ALKBH7Q9BT30 221 aaPredicted RBP11.16□□□□□ -0.62
PRPF4-201ENST00000374198 VSIRQ9H7M9 311 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 TMEM9BQ9NQ34 198 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 TRAPPC1Q9Y5R8 145 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 CCDC163A0A0D9SF12 145 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 AQP7O14520 342 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 IFNA5P01569 189 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 OR5G3P0C626 314 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 TMEM11P17152 192 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 LCN2P80188 198 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 UBE2V1Q13404 147 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 RNF151Q2KHN1 245 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 SLC25A24Q6NUK1 477 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 CMTM2Q8TAZ6 248 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 ADAMTS18Q8TE60 1221 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 RPUSD4Q96CM3 377 aaKnown RBP11.16□□□□□ -0.62
PRPF4-201ENST00000374198 PLK3Q9H4B4 646 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 MANBALQ9NQG1 85 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 TMED7-TICAM2A0A0A6YYA0 188 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 PDGFBP01127 241 aaPredicted RBP11.16□□□□□ -0.62
PRPF4-201ENST00000374198 GP1BBP13224 206 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 ANOS1P23352 680 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 ZNF133P52736 654 aaPredicted RBP11.16□□□□□ -0.62
PRPF4-201ENST00000374198 SRPXP78539 464 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 KCNIP4Q6PIL6 250 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 CALHM1Q8IU99 346 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 SLC46A1Q96NT5 459 aa11.16□□□□□ -0.62
PRPF4-201ENST00000374198 PCNX3Q9H6A9 2034 aa11.15□□□□□ -0.62
PRPF4-201ENST00000374198 TRAV39A0A0B4J263 110 aa11.15□□□□□ -0.62
PRPF4-201ENST00000374198 C3orf85A0A1B0GTC6 90 aa11.15□□□□□ -0.62
PRPF4-201ENST00000374198 NPIPA5E9PKD4 350 aa11.15□□□□□ -0.62
PRPF4-201ENST00000374198 ZNF737O75373 536 aa11.15□□□□□ -0.62
PRPF4-201ENST00000374198 CLPSP04118 112 aa11.15□□□□□ -0.62
PRPF4-201ENST00000374198 ZNF121P58317 390 aaPredicted RBP11.15□□□□□ -0.62
PRPF4-201ENST00000374198 IGLV3-21P80748 117 aaPredicted RBP11.15□□□□□ -0.62
PRPF4-201ENST00000374198 TMEM41BQ5BJD5 291 aa11.15□□□□□ -0.62
PRPF4-201ENST00000374198 BAHD1Q8TBE0 780 aaPredicted RBP11.15□□□□□ -0.62
PRPF4-201ENST00000374198 VN1R17PQ8TDU5 208 aa11.15□□□□□ -0.62
PRPF4-201ENST00000374198 RSG1Q9BU20 258 aa11.15□□□□□ -0.62
PRPF4-201ENST00000374198 REPIN1Q9BWE0 567 aaKnown RBP11.15□□□□□ -0.62
PRPF4-201ENST00000374198 WNT16Q9UBV4 365 aa11.15□□□□□ -0.62
PRPF4-201ENST00000374198 NPIPA1Q9UND3 350 aa11.15□□□□□ -0.62
PRPF4-201ENST00000374198 CLDN16Q9Y5I7 305 aa11.15□□□□□ -0.62
PRPF4-201ENST00000374198 PXMP4Q9Y6I8 212 aa11.15□□□□□ -0.62
PRPF4-201ENST00000374198 LOC105371242A0A075B767 164 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 CHST1O43916 411 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 TRAPPC6AO75865 159 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 IL11P20809 199 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 CCL1P22362 96 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 IL3RAP26951 378 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 CDKN1AP38936 164 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 TPPP2P59282 170 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 PAFAH1B2P68402 229 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 ID3Q02535 119 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 DOK3Q7L591 496 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 TMEM222Q9H0R3 208 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 FGF22Q9HCT0 170 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 PRTFDC1Q9NRG1 225 aa11.15□□□□□ -0.63
PRPF4-201ENST00000374198 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 MS4A18H0YCH9 400 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 SLC33A1O00400 549 aaPredicted RBP11.14□□□□□ -0.63
PRPF4-201ENST00000374198 MPPED1O15442 326 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 ADAM20O43506 726 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 TNFSF12O43508 249 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 TOMM40O96008 361 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 PPBPP02775 128 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 MEF2BQ02080 365 aaPredicted RBP11.14□□□□□ -0.63
PRPF4-201ENST00000374198 MS4A18Q3C1V0 323 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 ACSF3Q4G176 576 aaPredicted RBP11.14□□□□□ -0.63
PRPF4-201ENST00000374198 OR8G2PQ6IF36 304 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 SMIM15Q7Z3B0 74 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 ZNF695Q8IW36 515 aa11.14□□□□□ -0.63
PRPF4-201ENST00000374198 PLPPR1Q8TBJ4 325 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms