RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 OR5AP2Q8NGF4 316 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 OR4D10Q8NGI6 311 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 OR5H2Q8NGV7 314 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 PPP1R35Q8TAP8 253 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 CCL17Q92583 94 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 SNX22Q96L94 193 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 TINAGL1Q9GZM7 467 aaPredicted RBP9.86□□□□□ -0.83
CLN6-223ENST00000637823 ZNF286AQ9HBT8 521 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 Q9N2K0 584 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 ZNF222Q9UK12 451 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 LAMP3Q9UQV4 416 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 PPIAL4AQ9Y536 164 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 DOCK11Q5JSL3 2073 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 TMEM82A0PJX8 343 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 PSPNO60542 156 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 CLDN1O95832 211 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 PMP2P02689 132 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 TCRBP04435 133 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 AMY2AP04746 511 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 IFNA6P05013 189 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 CSN2P05814 226 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 ZNF735P0CB33 412 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 COX6B1P14854 86 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 COL8A2P25067 703 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 HRH1P35367 487 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 OR3A1P47881 315 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 CCR6P51684 374 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 CDK10Q15131 360 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 GRK1Q15835 563 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 VAX1Q5SQQ9 334 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 ATPAF1Q5TC12 328 aaPredicted RBP9.85□□□□□ -0.83
CLN6-223ENST00000637823 STUMQ69YW2 141 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 ZNF880Q6PDB4 577 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 C17orf107Q6ZR85 190 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 BTN2A1Q7KYR7 527 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 ZNF561Q8N587 486 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 OR51S1Q8NGJ8 323 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 OR5D13Q8NGL4 314 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 OR56B4Q8NH76 319 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 PLPPR1Q8TBJ4 325 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 MRPL30Q8TCC3 161 aaKnown RBP9.85□□□□□ -0.83
CLN6-223ENST00000637823 MAFIPQ8WZ33 124 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 SDSLQ96GA7 329 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 SLC6A7Q99884 636 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 PRRT1Q99946 306 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 MARVELD1Q9BSK0 173 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 DNTTIP1Q9H147 329 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 PPA2Q9H2U2 334 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 ZNF665Q9H7R5 613 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 DLL4Q9NR61 685 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 ANXA10Q9UJ72 324 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 SCP2D1Q9UJQ7 156 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 MGAT4AQ9UM21 535 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 NUBP2Q9Y5Y2 271 aa9.85□□□□□ -0.83
CLN6-223ENST00000637823 IGKV1D-8A0A087WSZ0 117 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 A0A1B0GVG6 124 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 TMEM30CPA0ZSE6 113 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 TRDCB7Z8K6 153 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 K7N7A8 449 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 ZNF737O75373 536 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 FSTL3O95633 263 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 TFF1P04155 84 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 ARPC4P59998 168 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 PAX5Q02548 391 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 ZMYND11Q15326 602 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 KCNJ8Q15842 424 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 FAAP20Q6NZ36 180 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 C20orf204Q6ZNR8 217 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 MOB1BQ7L9L4 216 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 OVCH2Q7RTZ1 564 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 TMEM17Q86X19 198 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 ARRDC1Q8N5I2 433 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 ASCC1Q8N9N2 400 aaKnown RBP9.84□□□□□ -0.83
CLN6-223ENST00000637823 DEFB108BQ8NET1 73 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 CREB3L1Q96BA8 519 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 MED30Q96HR3 178 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 SHARPINQ9H0F6 387 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 MMP28Q9H239 520 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 PLEKHF2Q9H8W4 249 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 MYOZ1Q9NP98 299 aaPredicted RBP9.84□□□□□ -0.83
CLN6-223ENST00000637823 NECAP2Q9NVZ3 263 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 DCAF16Q9NXF7 216 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 SLC2A8Q9NY64 477 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 METRNQ9UJH8 293 aa9.84□□□□□ -0.83
CLN6-223ENST00000637823 KIR2DS1A0A191URI9 304 aa9.83□□□□□ -0.84
CLN6-223ENST00000637823 TNFRSF13BO14836 293 aaPredicted RBP9.83□□□□□ -0.84
CLN6-223ENST00000637823 MGST3O14880 152 aa9.83□□□□□ -0.84
CLN6-223ENST00000637823 NDUFA2O43678 99 aa9.83□□□□□ -0.84
CLN6-223ENST00000637823 NDUFB6O95139 128 aa9.83□□□□□ -0.84
CLN6-223ENST00000637823 ZNF205O95201 554 aa9.83□□□□□ -0.84
CLN6-223ENST00000637823 GYPAP02724 150 aa9.83□□□□□ -0.84
CLN6-223ENST00000637823 H2AFB2P0C5Z0 115 aa9.83□□□□□ -0.84
CLN6-223ENST00000637823 KIR2DS4P43632 304 aa9.83□□□□□ -0.84
CLN6-223ENST00000637823 RAG2P55895 527 aa9.83□□□□□ -0.84
CLN6-223ENST00000637823 TSPAN5P62079 268 aa9.83□□□□□ -0.84
CLN6-223ENST00000637823 BTG1P62324 171 aa9.83□□□□□ -0.84
CLN6-223ENST00000637823 KIR2DS1Q14954 304 aa9.83□□□□□ -0.84
CLN6-223ENST00000637823 ATXN7L3Q14CW9 347 aaPredicted RBP9.83□□□□□ -0.84
CLN6-223ENST00000637823 RBMS2Q15434 407 aaKnown RBP9.83□□□□□ -0.84
CLN6-223ENST00000637823 RSBN1Q5VWQ0 802 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms