RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 A0A1B0GTQ1 180 aa1.57□□□□□ -2.16
TRAPPC11-210ENST00000513600 TVP23AA6NH52 213 aa1.57□□□□□ -2.16
TRAPPC11-210ENST00000513600 ARGFXA6NJG6 315 aa1.57□□□□□ -2.16
TRAPPC11-210ENST00000513600 ODF3BA8MYP8 253 aa1.57□□□□□ -2.16
TRAPPC11-210ENST00000513600 SLC25A20O43772 301 aa1.57□□□□□ -2.16
TRAPPC11-210ENST00000513600 MAGEA3P43357 314 aa1.57□□□□□ -2.16
TRAPPC11-210ENST00000513600 CEACAM16Q2WEN9 425 aa1.57□□□□□ -2.16
TRAPPC11-210ENST00000513600 ZCWPW2Q504Y3 356 aa1.57□□□□□ -2.16
TRAPPC11-210ENST00000513600 GAPTQ8N292 157 aa1.57□□□□□ -2.16
TRAPPC11-210ENST00000513600 REEP6Q96HR9 211 aa1.57□□□□□ -2.16
TRAPPC11-210ENST00000513600 VAT1Q99536 393 aa1.57□□□□□ -2.16
TRAPPC11-210ENST00000513600 BCL2L14Q9BZR8 327 aa1.57□□□□□ -2.16
TRAPPC11-210ENST00000513600 RGCCQ9H4X1 137 aa1.57□□□□□ -2.16
TRAPPC11-210ENST00000513600 SIGLEC16A6NMB1 481 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 F8VP50 259 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 TRAPPC3O43617 180 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 ENSAO43768 121 aaKnown RBP1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 SPOPO43791 374 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 ZNF189O75820 626 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 MYO1DO94832 1006 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 EVI2BP34910 448 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 GBE1Q04446 702 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 DEFB119Q8N690 84 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 APOL4Q9BPW4 351 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 SLC19A3Q9BZV2 496 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 CXCL16Q9H2A7 254 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 PRORYQ9H606 182 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 FAM206AQ9NX38 181 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 LINC00588Q9Y4M8 146 aa1.56□□□□□ -2.16
TRAPPC11-210ENST00000513600 ADAMTS7Q9UKP4 1686 aa1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 TRAV8-3A0A0A6YYJ7 113 aa1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 LOC102725191A0A1B0GVB3 256 aa1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 C2orf80Q0P641 193 aa1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 APOFQ13790 326 aa1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 DRAXINQ8NBI3 349 aaPredicted RBP1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 DOK4Q8TEW6 326 aa1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 CASTOR1Q8WTX7 329 aa1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 PDCD6IPQ8WUM4 868 aaKnown RBP1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 FAM131CQ96AQ9 280 aa1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 OR52B2Q96RD2 323 aa1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 ZNF251Q9BRH9 671 aa1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 UTP23Q9BRU9 249 aaKnown RBP1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 ACOT13Q9NPJ3 140 aa1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 PEF1Q9UBV8 284 aaKnown RBP1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 BTRCQ9Y297 605 aa1.55□□□□□ -2.16
TRAPPC11-210ENST00000513600 MIA3Q5JRA6 1907 aa1.54□□□□□ -2.16
TRAPPC11-210ENST00000513600 PGPA6NDG6 321 aa1.54□□□□□ -2.16
TRAPPC11-210ENST00000513600 PEX19P40855 299 aa1.54□□□□□ -2.16
TRAPPC11-210ENST00000513600 GABRA4P48169 554 aa1.54□□□□□ -2.16
TRAPPC11-210ENST00000513600 C16orf87Q6PH81 154 aa1.54□□□□□ -2.16
TRAPPC11-210ENST00000513600 KIAA1143Q96AT1 154 aaPredicted RBP1.54□□□□□ -2.16
TRAPPC11-210ENST00000513600 NXF2Q9GZY0 626 aaKnown RBP1.54□□□□□ -2.16
TRAPPC11-210ENST00000513600 DIABLOQ9NR28 239 aa1.54□□□□□ -2.16
TRAPPC11-210ENST00000513600 V9GYY9 64 aa1.54□□□□□ -2.16
TRAPPC11-210ENST00000513600 PTPRKQ15262 1439 aa1.54□□□□□ -2.16
TRAPPC11-210ENST00000513600 TMEM131Q92545 1883 aa1.54□□□□□ -2.16
TRAPPC11-210ENST00000513600 A0A0J9YX75 114 aa1.53□□□□□ -2.16
TRAPPC11-210ENST00000513600 A0A1B0GXF2 115 aa1.53□□□□□ -2.16
TRAPPC11-210ENST00000513600 NCF1BA6NI72 391 aaPredicted RBP1.53□□□□□ -2.16
TRAPPC11-210ENST00000513600 NCF1CA8MVU1 366 aaPredicted RBP1.53□□□□□ -2.16
TRAPPC11-210ENST00000513600 PLPP3O14495 311 aa1.53□□□□□ -2.16
TRAPPC11-210ENST00000513600 TSPAN31Q12999 210 aa1.53□□□□□ -2.16
TRAPPC11-210ENST00000513600 OR51L1Q8NGJ5 315 aa1.53□□□□□ -2.16
TRAPPC11-210ENST00000513600 AGR3Q8TD06 166 aa1.53□□□□□ -2.16
TRAPPC11-210ENST00000513600 PEX13Q92968 403 aa1.53□□□□□ -2.16
TRAPPC11-210ENST00000513600 DOCK10Q96BY6 2186 aa1.53□□□□□ -2.16
TRAPPC11-210ENST00000513600 CAPZA3Q96KX2 299 aa1.53□□□□□ -2.16
TRAPPC11-210ENST00000513600 SDHAF2Q9NX18 166 aa1.53□□□□□ -2.16
TRAPPC11-210ENST00000513600 GBF1Q92538 1859 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 AQRO60306 1485 aaKnown RBP eCLIP1.52□□□□□ -2.176e-6■■■■□ 25.1
TRAPPC11-210ENST00000513600 WDR19Q8NEZ3 1342 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 TOR1AO14656 332 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 ZNF7P17097 686 aaPredicted RBP1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 STX4Q12846 297 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 WDR43Q15061 677 aaKnown RBP eCLIP1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 SS18Q15532 418 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 MMDQ15546 238 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 LINC00523Q86TU6 105 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 FAM58AQ8N1B3 248 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 SPPL2BQ8TCT7 592 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 DCANP1Q8TF63 244 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 KCTD4Q8WVF5 259 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 NELFBQ8WX92 580 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 ZNF707Q96C28 371 aaPredicted RBP1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 CHID1Q9BWS9 393 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 PSORS1C2Q9UIG4 136 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 POMPQ9Y244 141 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 CHTOPQ9Y3Y2 248 aaKnown RBP1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 SHANK3Q9BYB0 1731 aa1.52□□□□□ -2.17
TRAPPC11-210ENST00000513600 NEURL4Q96JN8 1562 aa1.51□□□□□ -2.17
TRAPPC11-210ENST00000513600 IGSF23A1L1A6 192 aa1.51□□□□□ -2.17
TRAPPC11-210ENST00000513600 A8MWP6 167 aa1.51□□□□□ -2.17
TRAPPC11-210ENST00000513600 K7EN84 100 aa1.51□□□□□ -2.17
TRAPPC11-210ENST00000513600 EMP2P54851 167 aa1.51□□□□□ -2.17
TRAPPC11-210ENST00000513600 RESP18Q5W5W9 173 aa1.51□□□□□ -2.17
TRAPPC11-210ENST00000513600 SELENOHQ8IZQ5 122 aaKnown RBP1.51□□□□□ -2.17
TRAPPC11-210ENST00000513600 KRTCAP2Q8N6L1 136 aa1.51□□□□□ -2.17
TRAPPC11-210ENST00000513600 TDRD3Q9H7E2 651 aaKnown RBP1.51□□□□□ -2.17
TRAPPC11-210ENST00000513600 ANGP03950 147 aaKnown RBP1.5□□□□□ -2.17
TRAPPC11-210ENST00000513600 PLTPP55058 493 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms