RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 Q6P435 159 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 BAP18Q8IXM2 172 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 BVESQ8NE79 360 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 C1orf162Q8NEQ5 155 aaPredicted RBP19.12■□□□□ 0.65
PCDH1-204ENST00000503492 RIMS4Q9H426 269 aaPredicted RBP19.12■□□□□ 0.65
PCDH1-204ENST00000503492 NARFLQ9H6Q4 476 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 SESN1Q9Y6P5 492 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 H7C1Q1 480 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 LGALS8O00214 317 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 DEDDO75618 318 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 TNFSF13O75888 250 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 CRYZL1O95825 349 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 HKR1P10072 659 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 HOXC12P31275 282 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 NBL1P41271 181 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 IFT22Q9H7X7 185 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 TRBV6-6A0A0A6YYG2 114 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 MPPED1O15442 326 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 SCO1O75880 301 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 TUSC2O75896 110 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 ZP3P21754 424 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 ERVK11-1P61568 191 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 ZNF154Q13106 437 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 IGFL3Q6UXB1 125 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 LGI3Q8N145 548 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 EIF4E3Q8N5X7 224 aaKnown RBP19.11■□□□□ 0.65
PCDH1-204ENST00000503492 KLF14Q8TD94 323 aaPredicted RBP19.11■□□□□ 0.65
PCDH1-204ENST00000503492 SECTM1Q8WVN6 248 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 IGKV1D-13A0A0B4J2D9 117 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 H0YL77 283 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 DEGS1O15121 323 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 WDR1O75083 606 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 GLAP06280 429 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 IGKV1-13P0DP09 117 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 ZNF44P15621 663 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 LDLRAD3Q86YD5 345 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 ZNF610Q8N9Z0 462 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 RHOFQ9HBH0 211 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 LSM5Q9Y4Y9 91 aaKnown RBP19.11■□□□□ 0.65
PCDH1-204ENST00000503492 ZNF292O60281 2723 aa19.11■□□□□ 0.65
PCDH1-204ENST00000503492 IGHV3-64DA0A0J9YX35 117 aa19.1■□□□□ 0.65
PCDH1-204ENST00000503492 ZNF880Q6PDB4 577 aa19.1■□□□□ 0.65
PCDH1-204ENST00000503492 SEM1Q6ZVN7 128 aa19.1■□□□□ 0.65
PCDH1-204ENST00000503492 CXorf67Q86X51 503 aaPredicted RBP19.1■□□□□ 0.65
PCDH1-204ENST00000503492 STARD4Q96DR4 205 aa19.1■□□□□ 0.65
PCDH1-204ENST00000503492 OPN3Q9H1Y3 402 aaPredicted RBP19.1■□□□□ 0.65
PCDH1-204ENST00000503492 C3orf85A0A1B0GTC6 90 aa19.1■□□□□ 0.65
PCDH1-204ENST00000503492 CDIPTO14735 213 aa19.1■□□□□ 0.65
PCDH1-204ENST00000503492 SCGB1D2O95969 90 aa19.1■□□□□ 0.65
PCDH1-204ENST00000503492 CTXN2P0C2S0 81 aa19.1■□□□□ 0.65
PCDH1-204ENST00000503492 RCC1P18754 421 aaPredicted RBP19.1■□□□□ 0.65
PCDH1-204ENST00000503492 PCSK4Q6UW60 755 aa19.1■□□□□ 0.65
PCDH1-204ENST00000503492 ZNF818PQ6ZRF7 136 aa19.1■□□□□ 0.65
PCDH1-204ENST00000503492 PRR14LQ5THK1 2151 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 RIF1Q5UIP0 2472 aaKnown RBP19.09■□□□□ 0.65
PCDH1-204ENST00000503492 A0A1B0GW55 424 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 CGAP01215 116 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 MBPP02686 304 aaPredicted RBP19.09■□□□□ 0.65
PCDH1-204ENST00000503492 DUX4L2P0CJ85 424 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 DUX4L3P0CJ86 424 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 DUX4L4P0CJ87 422 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 DUX4L5P0CJ88 424 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 DUX4L6P0CJ89 424 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 DUX4L7P0CJ90 424 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 SMCO1Q147U7 214 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 FAM185AQ8N0U4 392 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 PRRX2Q99811 253 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 DUX4Q9UBX2 424 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 POLDIP2Q9Y2S7 368 aa19.09■□□□□ 0.65
PCDH1-204ENST00000503492 INTS1Q8N201 2190 aaKnown RBP19.09■□□□□ 0.65
PCDH1-204ENST00000503492 SPENQ96T58 3664 aaKnown RBP19.09■□□□□ 0.65
PCDH1-204ENST00000503492 SELEP16581 610 aa19.08■□□□□ 0.65
PCDH1-204ENST00000503492 SPIN3Q5JUX0 258 aa19.08■□□□□ 0.65
PCDH1-204ENST00000503492 MEX3BQ6ZN04 569 aaKnown RBP19.08■□□□□ 0.65
PCDH1-204ENST00000503492 TBC1D26Q86UD7 250 aa19.08■□□□□ 0.65
PCDH1-204ENST00000503492 ZNF565Q8N9K5 539 aa19.08■□□□□ 0.65
PCDH1-204ENST00000503492 PRRC2CQ9Y520 2896 aaKnown RBP19.08■□□□□ 0.65
PCDH1-204ENST00000503492 PGA5P0DJD9 388 aa19.08■□□□□ 0.64
PCDH1-204ENST00000503492 RPL12P30050 165 aaKnown RBP19.08■□□□□ 0.64
PCDH1-204ENST00000503492 RND3P61587 244 aa19.08■□□□□ 0.64
PCDH1-204ENST00000503492 OR8G1Q15617 311 aa19.08■□□□□ 0.64
PCDH1-204ENST00000503492 Q8IYB0 196 aa19.08■□□□□ 0.64
PCDH1-204ENST00000503492 GAPTQ8N292 157 aa19.08■□□□□ 0.64
PCDH1-204ENST00000503492 SLC35G3Q8N808 338 aa19.08■□□□□ 0.64
PCDH1-204ENST00000503492 NRIP2Q9BQI9 281 aa19.08■□□□□ 0.64
PCDH1-204ENST00000503492 ZNF71Q9NQZ8 489 aaPredicted RBP19.08■□□□□ 0.64
PCDH1-204ENST00000503492 FBXO9Q9UK97 447 aaPredicted RBP19.08■□□□□ 0.64
PCDH1-204ENST00000503492 PROCRQ9UNN8 238 aa19.08■□□□□ 0.64
PCDH1-204ENST00000503492 GTF3C1Q12789 2109 aa19.08■□□□□ 0.64
PCDH1-204ENST00000503492 CFAP47Q6ZTR5 3102 aa19.08■□□□□ 0.64
PCDH1-204ENST00000503492 FRYQ5TBA9 3013 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 GPR31O00270 319 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 FGF16O43320 207 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 GRPP07492 148 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 CECR9P0C854 216 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 OR52M1Q8NGK5 317 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 TMED6Q8WW62 240 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 GPHA2Q96T91 129 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 DNTTIP1Q9H147 329 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 OR2S2Q9NQN1 319 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms