RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 USH1CQ9Y6N9 552 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 ATRNO75882 1429 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 TRAV8-3A0A0A6YYJ7 113 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 IGHV2-26A0A0B4J1V2 119 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 A0A1W2PNM2 257 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 NDUFS8O00217 210 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 PLPP3O14495 311 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 SPOPO43791 374 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 CRABP2P29373 138 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 TPBGQ13641 420 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 TNXAQ16473 311 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 ZCWPW2Q504Y3 356 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 ACTBL2Q562R1 376 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 LAMTOR1Q6IAA8 161 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 NIT1Q86X76 327 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 SLC25A45Q8N413 288 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 OR8K1Q8NGG5 319 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 CLHC1Q8NHS4 586 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 LRRC20Q8TCA0 184 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 ZNF75CPQ92670 426 aaPredicted RBP1.46□□□□□ -2.18
LTN1-204ENST00000475344 RAD51AP1Q96B01 352 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 LRRC39Q96DD0 335 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 CMBLQ96DG6 245 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 ZNF396Q96N95 335 aaPredicted RBP1.46□□□□□ -2.18
LTN1-204ENST00000475344 APOL4Q9BPW4 351 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 SLC25A31Q9H0C2 315 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 OR2D2Q9H210 308 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 GOLPH3Q9H4A6 298 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 POMKQ9H5K3 350 aa1.46□□□□□ -2.18
LTN1-204ENST00000475344 TRBV24-1A0A075B6N3 115 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 MGAT4DA6NG13 374 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 TMEM250H0YL14 139 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 BOLA2-SMG1P6H3BVE0 249 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 I3L4J1 428 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 hCG_2039718K7EN88 272 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 M0QXV9 152 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 ENSAO43768 121 aaKnown RBP1.45□□□□□ -2.18
LTN1-204ENST00000475344 PDCD6O75340 191 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 SOX14O95416 240 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 CA2P00918 260 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 IGKV1-16P04430 117 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 CTSGP08311 255 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 CGB3P0DN86 165 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 CGB7P0DN87 165 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 PSKH1P11801 424 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 IFI30P13284 250 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 C1QTNF8P60827 252 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 HBG1P69891 147 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 HBG2P69892 147 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 PSG3Q16557 428 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 NXNL2Q5VZ03 156 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 LYPD6Q86Y78 171 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 RBM45Q8IUH3 476 aaKnown RBP1.45□□□□□ -2.18
LTN1-204ENST00000475344 FER1L6-AS1Q8NA97 138 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 ZMYND19Q96E35 227 aaPredicted RBP1.45□□□□□ -2.18
LTN1-204ENST00000475344 HINT2Q9BX68 163 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 ZNF436Q9C0F3 470 aaPredicted RBP1.45□□□□□ -2.18
LTN1-204ENST00000475344 CYB5R1Q9UHQ9 305 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 RBMX2Q9Y388 322 aaKnown RBP1.45□□□□□ -2.18
LTN1-204ENST00000475344 U3KQK5 164 aa1.45□□□□□ -2.18
LTN1-204ENST00000475344 BRD4O60885 1362 aaPredicted RBP1.45□□□□□ -2.18
LTN1-204ENST00000475344 RAB19A4D1S5 217 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 OR5H14A6NHG9 310 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 RNASEK-C17orf49H0YIS7 233 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 PSMD11O00231 422 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 CRXO43186 299 aaPredicted RBP1.44□□□□□ -2.18
LTN1-204ENST00000475344 ZNF73O43830 326 aaPredicted RBP1.44□□□□□ -2.18
LTN1-204ENST00000475344 S100A9P06702 114 aaKnown RBP1.44□□□□□ -2.18
LTN1-204ENST00000475344 GUSBP08236 651 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 CTLA4P16410 223 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 M6PRP20645 277 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 CBX5P45973 191 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 CEACAM21Q3KPI0 293 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 FAM162BQ5T6X4 162 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 CYHR1Q6ZMK1 362 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 Q6ZT83 130 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 FAM183BPQ6ZVS7 135 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 ZIC4Q8N9L1 334 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 DTD1Q8TEA8 209 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 TMEM239Q8WW34 195 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 CLDN23Q96B33 292 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 B9D2Q9BPU9 175 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 PRRG3Q9BZD7 231 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 ULBP1Q9BZM6 244 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 TMBIM4Q9HC24 238 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 OR5V1Q9UGF6 321 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 CACNA1GO43497 2377 aa1.44□□□□□ -2.18
LTN1-204ENST00000475344 LTBP2Q14767 1821 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 IGKV1D-37A0A075B6S9 117 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 IGHV3OR15-7A0A075B7D8 119 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 A0A1W2PRG6 482 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 GOLGA8IPA6NC78 632 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 FAM183AA6NL82 134 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 G3V3Q6 166 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 CDIPTO14735 213 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 SH2D1AO60880 128 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 APOA1P02647 267 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 GABRA1P14867 456 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 TSPOP30536 169 aa1.43□□□□□ -2.18
LTN1-204ENST00000475344 PYCR1P32322 319 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms