RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 RPP25Q9BUL9 199 aaKnown RBP11.2□□□□□ -0.62
PRPF4-201ENST00000374198 NCOR1P1Q9H4R4 102 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 STARD5Q9NSY2 213 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 TMEM106BQ9NUM4 274 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 NECAP2Q9NVZ3 263 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 SLC17A4Q9Y2C5 497 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 PAM16Q9Y3D7 125 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 IGKV1D-43A0A0B4J1Z2 117 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 IGKV1-9A0A0C4DH69 117 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 M0R296 226 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 HLA-DOBP13765 273 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 ZNF17P17021 662 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 UCP3P55916 312 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 RPL23P62829 140 aaKnown RBP11.2□□□□□ -0.62
PRPF4-201ENST00000374198 BAXQ07812 192 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 DMRTC1Q5HYR2 192 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 TPTE2P1Q5T6R2 138 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 CST9LP1Q5W188 147 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 ORAOV1Q8WV07 137 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 ATP5SQ99766 215 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 TM2D1Q9BX74 207 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 MAGT1Q9H0U3 335 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 RPRMQ9NS64 109 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 TBC1D29Q9UFV1 150 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 MSTNO14793 375 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 LILRA1O75019 489 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 NDUFB8O95169 186 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 UTS2O95399 124 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 CD33P20138 364 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 GABREP78334 506 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 RTP5Q14D33 572 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 TCEA2Q15560 299 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 MEX3BQ6ZN04 569 aaKnown RBP11.19□□□□□ -0.62
PRPF4-201ENST00000374198 MRGPRGQ86SM5 289 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 OR11L1Q8NGX0 322 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 MBD3L1Q8WWY6 194 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 OR51I2Q9H344 312 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 PLEKHJ1Q9NW61 149 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 A0A1B0GUS0 222 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 CNOT4O95628 575 aaKnown RBP11.19□□□□□ -0.62
PRPF4-201ENST00000374198 ADH5P11766 374 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 PVRP15151 417 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 SLC6A8P48029 635 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 FGF8P55075 233 aaPredicted RBP11.19□□□□□ -0.62
PRPF4-201ENST00000374198 ZNF154Q13106 437 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 OR10G6Q8NH81 332 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 OR2V1Q8NHB1 315 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 FAM122AQ96E09 287 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 FAM71F1Q96KD3 344 aaPredicted RBP11.19□□□□□ -0.62
PRPF4-201ENST00000374198 DGAT2Q96PD7 388 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 LRFN3Q9BTN0 628 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 VAMP8Q9BV40 100 aa11.19□□□□□ -0.62
PRPF4-201ENST00000374198 CHD3Q12873 2000 aaKnown RBP11.18□□□□□ -0.62
PRPF4-201ENST00000374198 SHISA7A6NL88 538 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 RRADP55042 308 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 UBE2NP61088 152 aaKnown RBP11.18□□□□□ -0.62
PRPF4-201ENST00000374198 KISS1Q15726 138 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 CXorf66Q5JRM2 361 aaPredicted RBP11.18□□□□□ -0.62
PRPF4-201ENST00000374198 TECTBQ96PL2 329 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 CIB3Q96Q77 187 aaPredicted RBP11.18□□□□□ -0.62
PRPF4-201ENST00000374198 A0A1W2PN81 502 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 LRRC3CA6NJW4 275 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 HCRTR2O43614 444 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 KBTBD11O94819 623 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 TMEM50AO95807 157 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 SRFP11831 508 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 TCN2P20062 427 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 CHRNA7P36544 502 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 SRP14P37108 136 aaKnown RBP11.18□□□□□ -0.62
PRPF4-201ENST00000374198 VIPR2P41587 438 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 FUT7Q11130 342 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 ZNF726P1Q15940 193 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 C11orf40Q8WZ69 217 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 MOB3AQ96BX8 217 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 ANAPC16Q96DE5 110 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 GABRG3Q99928 467 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 RTN4RQ9BZR6 473 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 ELL3Q9HB65 397 aaPredicted RBP11.18□□□□□ -0.62
PRPF4-201ENST00000374198 RNF150Q9ULK6 438 aa11.18□□□□□ -0.62
PRPF4-201ENST00000374198 PRR33A8MZF0 331 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 TSPAN2O60636 221 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 IL33O95760 270 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 DRD3P35462 400 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 MRPS34P82930 218 aaKnown RBP11.17□□□□□ -0.62
PRPF4-201ENST00000374198 MMDQ15546 238 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 ATP6V1FQ16864 119 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 CRIP3Q6Q6R5 217 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 Q6ZWC4 215 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 FAM57BQ71RH2 274 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 WDFY1Q8IWB7 410 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 D2HGDHQ8N465 521 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 STPG4Q8N801 248 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 OR8B12Q8NGG6 310 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 OR1L6Q8NGR2 347 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 OIT3Q8WWZ8 545 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 ELSPBP1Q96BH3 223 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 MOB1AQ9H8S9 216 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 PPIAL4AQ9Y536 164 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 MUC3AQ02505 3323 aa11.17□□□□□ -0.62
PRPF4-201ENST00000374198 DOCK9Q9BZ29 2069 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms