RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 OSR2Q8N2R0 312 aa13.02□□□□□ -0.33
HDDC2-201ENST00000318787 OR11H6Q8NGC7 330 aa13.02□□□□□ -0.33
HDDC2-201ENST00000318787 OR4D6Q8NGJ1 314 aa13.02□□□□□ -0.33
HDDC2-201ENST00000318787 NEK7Q8TDX7 302 aa13.02□□□□□ -0.33
HDDC2-201ENST00000318787 MYDGFQ969H8 173 aa13.02□□□□□ -0.33
HDDC2-201ENST00000318787 MUL1Q969V5 352 aa13.02□□□□□ -0.33
HDDC2-201ENST00000318787 MND1Q9BWT6 205 aa13.02□□□□□ -0.33
HDDC2-201ENST00000318787 VCX3BQ9H321 246 aa13.02□□□□□ -0.33
HDDC2-201ENST00000318787 KIF25Q9UIL4 384 aa13.02□□□□□ -0.33
HDDC2-201ENST00000318787 CSN2P05814 226 aa13.01□□□□□ -0.33
HDDC2-201ENST00000318787 JUNBP17275 347 aaPredicted RBP13.01□□□□□ -0.33
HDDC2-201ENST00000318787 IGFBP3P17936 291 aaPredicted RBP13.01□□□□□ -0.33
HDDC2-201ENST00000318787 DOC2BQ14184 412 aa13.01□□□□□ -0.33
HDDC2-201ENST00000318787 IL13RA2Q14627 380 aa13.01□□□□□ -0.33
HDDC2-201ENST00000318787 SLC35E4Q6ICL7 350 aa13.01□□□□□ -0.33
HDDC2-201ENST00000318787 OR52W1Q6IF63 320 aa13.01□□□□□ -0.33
HDDC2-201ENST00000318787 TMEM219Q86XT9 240 aa13.01□□□□□ -0.33
HDDC2-201ENST00000318787 ABHD12Q8N2K0 398 aa13.01□□□□□ -0.33
HDDC2-201ENST00000318787 SGCDQ92629 289 aa13.01□□□□□ -0.33
HDDC2-201ENST00000318787 TMED9Q9BVK6 235 aa13.01□□□□□ -0.33
HDDC2-201ENST00000318787 CCDC90BQ9GZT6 254 aa13.01□□□□□ -0.33
HDDC2-201ENST00000318787 OR6C3Q9NZP0 311 aa13.01□□□□□ -0.33
HDDC2-201ENST00000318787 ZNF581Q9P0T4 197 aa13.01□□□□□ -0.33
HDDC2-201ENST00000318787 MRPS28Q9Y2Q9 187 aaKnown RBP13.01□□□□□ -0.33
HDDC2-201ENST00000318787 TRAV24A0A0B4J272 114 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 A0A1W2PP11 408 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 F2RL2O00254 374 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 TOR1AO14656 332 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 GEMIN2O14893 280 aaKnown RBP13□□□□□ -0.33
HDDC2-201ENST00000318787 IGHV3-7P01780 117 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 GABRA5P31644 462 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 GDNFP39905 211 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 RBM11P57052 281 aaKnown RBP13□□□□□ -0.33
HDDC2-201ENST00000318787 LDLRAD2Q5SZI1 272 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 AWAT2Q6E213 333 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 IZUMO2Q6UXV1 221 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 SUMF2Q8NBJ7 301 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 OR51T1Q8NGJ9 327 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 OR4C13Q8NGP0 309 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 MALSU1Q96EH3 234 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 DERL3Q96Q80 235 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 DPCDQ9BVM2 203 aaPredicted RBP13□□□□□ -0.33
HDDC2-201ENST00000318787 BARHL1Q9BZE3 327 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 FKBP14Q9NWM8 211 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 PAK1IP1Q9NWT1 392 aaPredicted RBP13□□□□□ -0.33
HDDC2-201ENST00000318787 TAS2R3Q9NYW6 316 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 SIGLEC9Q9Y336 463 aa13□□□□□ -0.33
HDDC2-201ENST00000318787 TRAV39A0A0B4J263 110 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 FAM90A8PA6NJQ4 464 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 ZNF729A6NN14 1252 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-201ENST00000318787 CHST1O43916 411 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 HSMCR30P0CW71 290 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 FSTP19883 344 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 MAPK3P27361 379 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-201ENST00000318787 HTR1DP28221 377 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 INSL4Q14641 139 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 ARSJQ5FYB0 599 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-201ENST00000318787 GLIPR1L1Q6UWM5 242 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 HEPN1Q6WQI6 88 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 OR13A1Q8NGR1 328 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 PLPPR1Q8TBJ4 325 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 MRGPRDQ8TDS7 321 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 OR5M11Q96RB7 305 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 ZNF286AQ9HBT8 521 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 TCF7L1Q9HCS4 588 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 RAB18Q9NP72 206 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 PCDHB16Q9NRJ7 776 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 TPRKBQ9Y3C4 175 aa12.99□□□□□ -0.33
HDDC2-201ENST00000318787 TRBV5-7A0A0A0MS05 114 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 GTF2F2P13984 249 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 KRTAP10-3P60369 221 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 SPHARQ15513 63 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 AANATQ16613 207 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 RBM48Q5RL73 367 aaKnown RBP12.98□□□□□ -0.33
HDDC2-201ENST00000318787 ASCL4Q6XD76 172 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 ZNF565Q8N9K5 539 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 ZNF596Q8TC21 504 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 CORO2AQ92828 525 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 LEAP2Q969E1 77 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 CNBD2Q96M20 576 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 CDCA4Q9BXL8 241 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 BANF2Q9H503 90 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 CALYQ9NYX4 217 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 IL36GQ9NZH8 169 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 FOXJ3Q9UPW0 622 aa12.98□□□□□ -0.33
HDDC2-201ENST00000318787 TET2Q6N021 2002 aaPredicted RBP12.97□□□□□ -0.33
HDDC2-201ENST00000318787 ZNF780AO75290 641 aaPredicted RBP12.97□□□□□ -0.33
HDDC2-201ENST00000318787 TSPAN9O75954 239 aa12.97□□□□□ -0.33
HDDC2-201ENST00000318787 PROK1P58294 105 aa12.97□□□□□ -0.33
HDDC2-201ENST00000318787 GPR176Q14439 515 aa12.97□□□□□ -0.33
HDDC2-201ENST00000318787 C17orf58Q2M2W7 97 aa12.97□□□□□ -0.33
HDDC2-201ENST00000318787 FAM27D1Q5T7N8 215 aa12.97□□□□□ -0.33
HDDC2-201ENST00000318787 MINOS1Q5TGZ0 78 aa12.97□□□□□ -0.33
HDDC2-201ENST00000318787 OR4P4Q8NGL7 312 aa12.97□□□□□ -0.33
HDDC2-201ENST00000318787 OR2T6Q8NHC8 308 aa12.97□□□□□ -0.33
HDDC2-201ENST00000318787 RFESDQ8TAC1 157 aa12.97□□□□□ -0.33
HDDC2-201ENST00000318787 PIFOQ8TCI5 191 aa12.97□□□□□ -0.33
HDDC2-201ENST00000318787 NPFFR1Q9GZQ6 430 aa12.97□□□□□ -0.33
HDDC2-201ENST00000318787 C16orf95Q9H693 158 aa12.97□□□□□ -0.33
HDDC2-201ENST00000318787 TCF19Q9Y242 345 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms