RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 ARHGAP5-AS1Q96IT6 56 aa12.58□□□□□ -0.4
ZC3H4-201ENST00000253048 SNX22Q96L94 193 aa12.58□□□□□ -0.4
ZC3H4-201ENST00000253048 WDR13Q9H1Z4 485 aa12.58□□□□□ -0.4
ZC3H4-201ENST00000253048 HLA-GP17693 338 aa12.58□□□□□ -0.4
ZC3H4-201ENST00000253048 PRDX2P32119 198 aa12.58□□□□□ -0.4
ZC3H4-201ENST00000253048 SLC51BQ86UW2 128 aa12.58□□□□□ -0.4
ZC3H4-201ENST00000253048 PXT1Q8NFP0 134 aa12.58□□□□□ -0.4
ZC3H4-201ENST00000253048 K7N7A8 449 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 SYNGR2O43760 224 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 PDGFAP04085 211 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 SLC38A11Q08AI6 406 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 RPEL1Q2QD12 228 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 FAM219AQ8IW50 185 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 C9orf40Q8IXQ3 194 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 SCARB1Q8WTV0 552 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 ITLN1Q8WWA0 313 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 C14orf79Q96F83 325 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 GUCD1Q96NT3 240 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 GABARAPL3Q9BY60 117 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 BCORQ6W2J9 1755 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 RELAQ04206 551 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 CEBPEQ15744 281 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 C6orf201Q7Z4U5 140 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 FAM181AQ8N9Y4 354 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 OR1L6Q8NGR2 347 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 IGHV1-69-2A0A0G2JMI3 117 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 C3orf85A0A1B0GTC6 90 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 TRDCB7Z8K6 153 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 CHST1O43916 411 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 BTN1A1Q13410 526 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 ZXDCQ2QGD7 858 aaPredicted RBP12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 SMUG1Q53HV7 270 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 AMMECR1LQ6DCA0 310 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 A0A1W2PRX2 142 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 MPZL1O95297 269 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 OR2C1O95371 312 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 VSIG10L2P0DP72 767 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 ATP5G2Q06055 141 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 ETFDHQ16134 617 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 OR8B12Q8NGG6 310 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 PRSS3P2Q8NHM4 247 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 SH2D2AQ9NP31 389 aa12.57□□□□□ -0.4
ZC3H4-201ENST00000253048 LOC102724200A0A096LPH7 203 aaPredicted RBP12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 CD3DP04234 171 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 PDZD11Q5EBL8 140 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 OR4C13Q8NGP0 309 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 OR10J6PQ8NGY7 276 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 C10orf90Q96M02 699 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 APOBEC3AP31941 199 aaPredicted RBP12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 EAF1Q96JC9 268 aaPredicted RBP12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 TMPRSS13Q9BYE2 586 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 SLC17A2O00624 439 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 SULT1A1P50225 295 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 RANP62826 216 aaKnown RBP12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 CDCP2Q5VXM1 449 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 RPS4Y2Q8TD47 263 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 C16orf92Q96LL3 132 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 SIGLEC7Q9Y286 467 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 ZNF721Q8TF20 911 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 TMED6Q8WW62 240 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 HGDQ93099 445 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 SLC25A46Q96AG3 418 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 WDR34Q96EX3 536 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 TUBGCP6Q96RT7 1819 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 MAMSTRQ6ZN01 415 aa12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 MYPOPQ86VE0 399 aaPredicted RBP12.56□□□□□ -0.4
ZC3H4-201ENST00000253048 HIST1H1DP16402 221 aaKnown RBP12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 CEBPDP49716 269 aaPredicted RBP12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 ARF6P62330 175 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 C16orf82Q7Z2V1 217 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 LYG2Q86SG7 212 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 ORAI1Q96D31 301 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 ZNF426Q9BUY5 554 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 METTL1Q9UBP6 276 aaKnown RBP12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 LSMEM1Q8N8F7 131 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 SYT8Q8NBV8 401 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 S100A11P31949 105 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 DGCR2P98153 550 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 SSBP1Q04837 148 aaKnown RBP12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 TMEM229BQ8NBD8 167 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 NEU4Q8WWR8 484 aaPredicted RBP12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 SMIM7Q9BQ49 75 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 CACNG5Q9UF02 275 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 PLEKHB1Q9UF11 243 aaPredicted RBP12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 NUMA1Q14980 2115 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 H3BVH4 76 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 PSMB6P28072 239 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 SPNS2Q8IVW8 549 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 C5orf17Q8NAS9 161 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 OR4P4Q8NGL7 312 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 ANGPTL4Q9BY76 406 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 CD226Q15762 336 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 LINC00596Q86U02 117 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 C1orf162Q8NEQ5 155 aaPredicted RBP12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 OR1L8Q8NGR8 309 aa12.55□□□□□ -0.4
ZC3H4-201ENST00000253048 SHANK3Q9BYB0 1731 aa12.54□□□□□ -0.4
ZC3H4-201ENST00000253048 IGHV3-21A0A0B4J1V1 117 aa12.54□□□□□ -0.4
ZC3H4-201ENST00000253048 A0A1W2PPE3 182 aa12.54□□□□□ -0.4
ZC3H4-201ENST00000253048 CTLA4P16410 223 aa12.54□□□□□ -0.4
ZC3H4-201ENST00000253048 AESQ08117 197 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms