RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 NLKQ9UBE8 527 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 EDARQ9UNE0 448 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 A0A1W2PPR1 153 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 OR2AT4A6NND4 320 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 H7C1Q1 480 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 SIRPB1O00241 398 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 RAB3DO95716 219 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 CYB5R3P00387 301 aaPredicted RBP9.88□□□□□ -0.83
CLN6-223ENST00000637823 PSG2P11465 335 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 PLA2G2AP14555 144 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 MUC1P15941 1255 aaPredicted RBP9.88□□□□□ -0.83
CLN6-223ENST00000637823 SPNP16150 400 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 SLC6A1P30531 599 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 MEF2DQ14814 521 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 SRSF7Q16629 238 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLN6-223ENST00000637823 MICBQ29980 383 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 ACTBL2Q562R1 376 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 PAN3Q58A45 887 aaKnown RBP9.88□□□□□ -0.83
CLN6-223ENST00000637823 CD177Q8N6Q3 437 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 OR4S1Q8NGB4 309 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 OR5T2Q8NGG2 359 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 OR4C16Q8NGL9 310 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 OR4K15Q8NH41 348 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 CYYR1Q96J86 154 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 HDHD3Q9BSH5 251 aaPredicted RBP9.88□□□□□ -0.83
CLN6-223ENST00000637823 TRAF4Q9BUZ4 470 aaPredicted RBP9.88□□□□□ -0.83
CLN6-223ENST00000637823 CACNG6Q9BXT2 260 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 OCEL1Q9H607 264 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 CHMP1AQ9HD42 196 aaPredicted RBP9.88□□□□□ -0.83
CLN6-223ENST00000637823 C12orf4Q9NQ89 552 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 TMEM106BQ9NUM4 274 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 ETAA1Q9NY74 926 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 COPZ2Q9P299 210 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 KIAA2026Q5HYC2 2103 aa9.88□□□□□ -0.83
CLN6-223ENST00000637823 SPTAN1Q13813 2472 aaKnown RBP9.87□□□□□ -0.83
CLN6-223ENST00000637823 IGKV1D-17A0A075B6S4 117 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 TRBV6-6A0A0A6YYG2 114 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 IGHV1-69-2A0A0G2JMI3 117 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 TMEM178BH3BS89 294 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 J3QKU1 62 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 NAPSAO96009 420 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 HPXP02790 462 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 FCER2P06734 321 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 SOD3P08294 240 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 FCGR3AP08637 254 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 AMY2BP19961 511 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 HLA-DMAP28067 261 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 CD80P33681 288 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 BTCP35070 178 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 KCNJ3P48549 501 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 TAS2R46P59540 309 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 COL10A1Q03692 680 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 TLE4Q04727 773 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 PLA1AQ53H76 456 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 TEX36Q5VZQ5 186 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 SP5Q6BEB4 398 aaPredicted RBP9.87□□□□□ -0.83
CLN6-223ENST00000637823 OR52W1Q6IF63 320 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 Q6ZS49 121 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 BPIFB2Q8N4F0 458 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 BEST4Q8NFU0 473 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 ANGPTL6Q8NI99 470 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 NEU4Q8WWR8 484 aaPredicted RBP9.87□□□□□ -0.83
CLN6-223ENST00000637823 DYRK2Q92630 601 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 SNAPC3Q92966 411 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 DPAGT1Q9H3H5 408 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 UBTD1Q9HAC8 227 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 TMEM165Q9HC07 324 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 ZNF701Q9NV72 531 aaPredicted RBP9.87□□□□□ -0.83
CLN6-223ENST00000637823 MCUBQ9NWR8 336 aa9.87□□□□□ -0.83
CLN6-223ENST00000637823 ZNF230Q9UIE0 474 aaPredicted RBP9.87□□□□□ -0.83
CLN6-223ENST00000637823 DSCAML1Q8TD84 2053 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 PPIAL4EA0A075B759 164 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 IGHV3OR15-7A0A075B7D8 119 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 TRAV38-1A0A0B4J264 116 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 OOEPA6NGQ2 149 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 DISC1C4P0D8 188 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 PPIAL4DF5H284 164 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 M0QYG6 137 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 LGALS8O00214 317 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 HSPB6O14558 160 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 SSX4O60224 188 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 PPIAL4FP0DN26 164 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 GIFP27352 417 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 RBMXP38159 391 aaKnown RBP9.86□□□□□ -0.83
CLN6-223ENST00000637823 GABRA2P47869 451 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 OR3A3P47888 321 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 CEBPDP49716 269 aaPredicted RBP9.86□□□□□ -0.83
CLN6-223ENST00000637823 MRPS11P82912 194 aaKnown RBP9.86□□□□□ -0.83
CLN6-223ENST00000637823 HOXA4Q00056 320 aaPredicted RBP9.86□□□□□ -0.83
CLN6-223ENST00000637823 HFEQ30201 348 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 CHRFAM7AQ494W8 412 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 RNASE10Q5GAN6 216 aaKnown RBP9.86□□□□□ -0.83
CLN6-223ENST00000637823 FAM201AQ5SY85 155 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 SFRP4Q6FHJ7 346 aaPredicted RBP9.86□□□□□ -0.83
CLN6-223ENST00000637823 SLC35E4Q6ICL7 350 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 PLET1Q6UQ28 207 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 ZNF782Q6ZMW2 699 aaPredicted RBP9.86□□□□□ -0.83
CLN6-223ENST00000637823 ZNF497Q6ZNH5 498 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 TGIF2LYQ8IUE0 185 aa9.86□□□□□ -0.83
CLN6-223ENST00000637823 GAPTQ8N292 157 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms