RNA–Protein interactions for RNA: ENST00000561734.5

RPUSD1-202, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-202ENST00000561734 USB1Q9BQ65 265 aaKnown RBP17.42■□□□□ 0.38
RPUSD1-202ENST00000561734 PLSCR2Q9NRY7 297 aa17.42■□□□□ 0.38
RPUSD1-202ENST00000561734 C19orf12Q9NSK7 152 aa17.42■□□□□ 0.38
RPUSD1-202ENST00000561734 LRFN1Q9P244 771 aa17.42■□□□□ 0.38
RPUSD1-202ENST00000561734 TRIOBPQ9H2D6 2365 aa17.42■□□□□ 0.38
RPUSD1-202ENST00000561734 HLA-HP01893 362 aa17.41■□□□□ 0.38
RPUSD1-202ENST00000561734 CELA3AP09093 270 aa17.41■□□□□ 0.38
RPUSD1-202ENST00000561734 HOXA1P49639 335 aaPredicted RBP17.41■□□□□ 0.38
RPUSD1-202ENST00000561734 GPM6AP51674 278 aa17.41■□□□□ 0.38
RPUSD1-202ENST00000561734 GUK1Q16774 197 aa17.41■□□□□ 0.38
RPUSD1-202ENST00000561734 NRN1LQ496H8 165 aa17.41■□□□□ 0.38
RPUSD1-202ENST00000561734 DPPA2Q7Z7J5 298 aa17.41■□□□□ 0.38
RPUSD1-202ENST00000561734 REPIN1Q9BWE0 567 aaKnown RBP17.41■□□□□ 0.38
RPUSD1-202ENST00000561734 TMEM222Q9H0R3 208 aa17.41■□□□□ 0.38
RPUSD1-202ENST00000561734 PRDM6Q9NQX0 595 aa17.41■□□□□ 0.38
RPUSD1-202ENST00000561734 IL36RNQ9UBH0 155 aa17.41■□□□□ 0.38
RPUSD1-202ENST00000561734 IGKV3D-15A0A087WSY6 115 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 MED19A0JLT2 244 aaPredicted RBP17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 PCP4L1A6NKN8 68 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 TRDCB7Z8K6 153 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 LAMTOR5O43504 91 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 PRH1P02810 166 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 FOXG1P55316 489 aaPredicted RBP17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 UCP2P55851 309 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 EWSR1Q01844 656 aaKnown RBP eCLIP17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 GNMTQ14749 295 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 TBC1D26Q86UD7 250 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 COMMD1Q8N668 190 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 SUMF1Q8NBK3 374 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 BOD1Q96IK1 185 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 ESRP2Q9H6T0 727 aaKnown RBP17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 SMCO4Q9NRQ5 59 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 RYDENQ9NUL5 291 aaKnown RBP17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 BOKQ9UMX3 212 aaPredicted RBP17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 C5orf49A4QMS7 147 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 ZNF503-AS2A6NEH8 195 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 SCTP09683 121 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 THOC3Q96J01 351 aaKnown RBP17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 CLCC1Q96S66 551 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 GPHA2Q96T91 129 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 C11orf1Q9H5F2 150 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 Q9N2K0 584 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 BIN3Q9NQY0 253 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 FAM86C1Q9NVL1 165 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 ATPIF1Q9UII2 106 aa17.4■□□□□ 0.38
RPUSD1-202ENST00000561734 HSPB6O14558 160 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 KCNJ3P48549 501 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 LHX2P50458 406 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 SPIN3Q5JUX0 258 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 TUSC5Q8IXB3 177 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM185AQ8N0U4 392 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 EIF5A2Q9GZV4 153 aaKnown RBP17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 UBE2J1Q9Y385 318 aaPredicted RBP17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A10PA6NDY2 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A18PA6NE21 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A16PA6NEW6 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM24AA6NFZ4 105 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A20PA6NIJ5 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A8PA6NJQ4 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A7PA6NKC0 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A22PA8MWA6 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A12PA8MX19 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A5PA8MXJ8 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A23PA8MXZ1 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 CDS2O95674 445 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A15PP0C7V4 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A13PP0C7W8 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A14PP0C7W9 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FAM90A24PP0C7X0 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 FGF12P61328 243 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 SRPXP78539 464 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 HMGN3Q15651 99 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 ZNF818PQ6ZRF7 136 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 Q6ZS49 121 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 TMEM105Q8N8V8 129 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 C14orf79Q96F83 325 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 CDX2Q99626 313 aaPredicted RBP17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 HES7Q9BYE0 225 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 PRRG4Q9BZD6 226 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 LINC00470Q9BZP3 86 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 ZNF703Q9H7S9 590 aaPredicted RBP17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 CALHM2Q9HA72 323 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 RPS10P5Q9NQ39 176 aa17.39■□□□□ 0.37
RPUSD1-202ENST00000561734 COL27A1Q8IZC6 1860 aaPredicted RBP17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 NAPSAO96009 420 aa17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 TK1P04183 234 aa17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 POLR2GP62487 172 aaKnown RBP eCLIP17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 HERPUD1Q15011 391 aa17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 TMEM182Q6ZP80 229 aaPredicted RBP17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 MRPL21Q7Z2W9 205 aaKnown RBP17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 ZNF695Q8IW36 515 aa17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 OR2C3Q8N628 320 aa17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 OR2M7Q8NG81 312 aa17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 POM121Q96HA1 1249 aa17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 TMEM56Q96MV1 263 aa17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 SIGLEC12Q96PQ1 595 aa17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 STRAPQ9Y3F4 350 aaKnown RBP17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 TMEM56-RWDD3S4R434 201 aa17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 IGKV1D-13A0A0B4J2D9 117 aa17.38■□□□□ 0.37
RPUSD1-202ENST00000561734 IGSF23A1L1A6 192 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms