RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 DMXL1Q9Y485 3027 aa19.18■□□□□ 0.66
PCDH1-204ENST00000503492 ASPMQ8IZT6 3477 aa19.18■□□□□ 0.66
PCDH1-204ENST00000503492 FOXF2Q12947 444 aa19.18■□□□□ 0.66
PCDH1-204ENST00000503492 WDR86Q86TI4 376 aa19.18■□□□□ 0.66
PCDH1-204ENST00000503492 FAM58AQ8N1B3 248 aa19.18■□□□□ 0.66
PCDH1-204ENST00000503492 CYTL1Q9NRR1 136 aa19.18■□□□□ 0.66
PCDH1-204ENST00000503492 DLL3Q9NYJ7 618 aa19.18■□□□□ 0.66
PCDH1-204ENST00000503492 ZFHX4Q86UP3 3567 aa19.17■□□□□ 0.66
PCDH1-204ENST00000503492 TM4SF5O14894 197 aa19.17■□□□□ 0.66
PCDH1-204ENST00000503492 CNOT4O95628 575 aaKnown RBP19.17■□□□□ 0.66
PCDH1-204ENST00000503492 ALKBH6Q3KRA9 238 aa19.17■□□□□ 0.66
PCDH1-204ENST00000503492 ACSF3Q4G176 576 aaPredicted RBP19.17■□□□□ 0.66
PCDH1-204ENST00000503492 LINC00596Q86U02 117 aa19.17■□□□□ 0.66
PCDH1-204ENST00000503492 SLC25A40Q8TBP6 338 aa19.17■□□□□ 0.66
PCDH1-204ENST00000503492 AQP10Q96PS8 301 aa19.17■□□□□ 0.66
PCDH1-204ENST00000503492 J3QT63 122 aa19.17■□□□□ 0.66
PCDH1-204ENST00000503492 IFNA21P01568 189 aa19.17■□□□□ 0.66
PCDH1-204ENST00000503492 PET100P0DJ07 73 aa19.17■□□□□ 0.66
PCDH1-204ENST00000503492 GLI4P10075 376 aa19.17■□□□□ 0.66
PCDH1-204ENST00000503492 COX5AP20674 150 aa19.17■□□□□ 0.66
PCDH1-204ENST00000503492 TRAV24A0A0B4J272 114 aa19.16■□□□□ 0.66
PCDH1-204ENST00000503492 SNTB1Q13884 538 aaKnown RBP19.16■□□□□ 0.66
PCDH1-204ENST00000503492 IL13RA2Q14627 380 aa19.16■□□□□ 0.66
PCDH1-204ENST00000503492 RTP5Q14D33 572 aa19.16■□□□□ 0.66
PCDH1-204ENST00000503492 HERPUD1Q15011 391 aa19.16■□□□□ 0.66
PCDH1-204ENST00000503492 FOXRED2Q8IWF2 684 aa19.16■□□□□ 0.66
PCDH1-204ENST00000503492 STOML3Q8TAV4 291 aa19.16■□□□□ 0.66
PCDH1-204ENST00000503492 LRRC20Q8TCA0 184 aa19.16■□□□□ 0.66
PCDH1-204ENST00000503492 CNTNAP3BQ96NU0 1288 aa19.16■□□□□ 0.66
PCDH1-204ENST00000503492 RTL8AQ9BWD3 113 aa19.16■□□□□ 0.66
PCDH1-204ENST00000503492 CNTNAP3Q9BZ76 1288 aa19.16■□□□□ 0.66
PCDH1-204ENST00000503492 TUBD1Q9UJT1 453 aa19.16■□□□□ 0.66
PCDH1-204ENST00000503492 HS3ST1O14792 307 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 AGFG2O95081 481 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 UCP2P55851 309 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 ZADH2Q8N4Q0 377 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 WDR31Q8NA23 367 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 GLYATL2Q8WU03 294 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 RDH5Q92781 318 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 SLX1AQ9BQ83 275 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 SYT3Q9BQG1 590 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 SUCNR1Q9BXA5 334 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 SPACA1Q9HBV2 294 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 DNAJB11Q9UBS4 358 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 BET1O15155 118 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 NUP62P37198 522 aaPredicted RBP19.15■□□□□ 0.66
PCDH1-204ENST00000503492 ZNF169Q14929 603 aaPredicted RBP19.15■□□□□ 0.66
PCDH1-204ENST00000503492 C20orf204Q6ZNR8 217 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 LIAT1Q6ZQX7 453 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 LRTM2Q8N967 370 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 OR1J1Q8NGS3 322 aa19.15■□□□□ 0.66
PCDH1-204ENST00000503492 MSI2Q96DH6 328 aaKnown RBP19.15■□□□□ 0.66
PCDH1-204ENST00000503492 TRDCB7Z8K6 153 aa19.14■□□□□ 0.66
PCDH1-204ENST00000503492 RAC2P15153 192 aa19.14■□□□□ 0.66
PCDH1-204ENST00000503492 CBR1P16152 277 aa19.14■□□□□ 0.66
PCDH1-204ENST00000503492 PAN3Q58A45 887 aaKnown RBP19.14■□□□□ 0.66
PCDH1-204ENST00000503492 FAM76BQ5HYJ3 339 aa19.14■□□□□ 0.66
PCDH1-204ENST00000503492 LYZL2Q7Z4W2 148 aa19.14■□□□□ 0.66
PCDH1-204ENST00000503492 MRPL30Q8TCC3 161 aaKnown RBP19.14■□□□□ 0.66
PCDH1-204ENST00000503492 C18orf12Q96KH6 178 aa19.14■□□□□ 0.66
PCDH1-204ENST00000503492 SHARPINQ9H0F6 387 aa19.14■□□□□ 0.66
PCDH1-204ENST00000503492 BARX1Q9HBU1 254 aaPredicted RBP19.14■□□□□ 0.66
PCDH1-204ENST00000503492 DKK4Q9UBT3 224 aa19.14■□□□□ 0.66
PCDH1-204ENST00000503492 IGKV1-6A0A0C4DH72 117 aa19.14■□□□□ 0.65
PCDH1-204ENST00000503492 FGF2P09038 288 aa19.14■□□□□ 0.65
PCDH1-204ENST00000503492 HOXB1P14653 301 aaPredicted RBP19.14■□□□□ 0.65
PCDH1-204ENST00000503492 GNRHRP30968 328 aa19.14■□□□□ 0.65
PCDH1-204ENST00000503492 PSG7Q13046 419 aa19.14■□□□□ 0.65
PCDH1-204ENST00000503492 GTF3AQ92664 365 aaKnown RBP19.14■□□□□ 0.65
PCDH1-204ENST00000503492 ATP23Q9Y6H3 246 aa19.14■□□□□ 0.65
PCDH1-204ENST00000503492 LRP5LA4QPB2 252 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 A8MXK9 166 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 TK1P04183 234 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 ZNF585AQ6P3V2 769 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 CCDC71LQ8N9Z2 235 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 SCCPDHQ8NBX0 429 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 BOD1Q96IK1 185 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 LINC00052Q96N35 136 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 CACNA1GO43497 2377 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 KIR2DS1A0A191URI9 304 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 IQCF6A8MYZ5 107 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 AHRRA9YTQ3 701 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 PHF1O43189 567 aaPredicted RBP19.13■□□□□ 0.65
PCDH1-204ENST00000503492 DIRAS3O95661 229 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 IGKV3-15P01624 115 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 TPT1P13693 172 aaKnown RBP19.13■□□□□ 0.65
PCDH1-204ENST00000503492 KIR2DS4P43632 304 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 KCNJ3P48549 501 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 NAAAQ02083 359 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 KIR2DS1Q14954 304 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 OR2A2Q6IF42 318 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 HSD17B13Q7Z5P4 300 aaPredicted RBP19.13■□□□□ 0.65
PCDH1-204ENST00000503492 LHFPL5Q8TAF8 219 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 TP53RKQ96S44 253 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 ADAT1Q9BUB4 502 aaKnown RBP19.13■□□□□ 0.65
PCDH1-204ENST00000503492 SLC5A7Q9GZV3 580 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 PLSCR4Q9NRQ2 329 aa19.13■□□□□ 0.65
PCDH1-204ENST00000503492 ARID1AO14497 2285 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 SLC34A2O95436 690 aa19.12■□□□□ 0.65
PCDH1-204ENST00000503492 MPV17P39210 176 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms